C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000175164 ABO 9606 - 9:133250401-133275214 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000453660 ABO-001 133250401-133275201 processed_transcript
  ENST00000538324 ABO-201 133255602-133275214 protein_coding
  ENST00000611156 ABO-202 133255176-133275214 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000453660ENST00000538324ENST00000611156
Transcript ID Adipose Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000453660 N/A 0.033±0.00 0.751±0.00 N/A N/A 0.087±0.00 0.498±0.35 N/A 5.042±0.00 0.162±0.03 N/A
ENST00000538324 N/A 0.253±0.00 3.408±0.00 N/A N/A N/A 1.786±0.00 N/A 1.486±0.00 N/A N/A
ENST00000611156 1.899±0.00 0.176±0.00 N/A 0.480±0.45 14.042±0.00 0.193±0.00 N/A 0.569±0.00 N/A N/A 1.746±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006IU CIL_0006IU_0001 CGP 9:133205277-133275214
CIL_0006IX CIL_0006IX_0001 CGP 9:133250401-133336398

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004380 IEA glycoprotein-fucosylgalactoside alpha-N-acetylgalactosaminyltransferase activity
GO:0004381 IEA fucosylgalactoside 3-alpha-galactosyltransferase activity
GO:0005576 IEA extracellular region
GO:0005794 IEA Golgi apparatus
GO:0005975 IEA carbohydrate metabolic process
GO:0006486 IEA protein glycosylation
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016758 IEA transferase activity, transferring hexosyl groups
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005257 protein_coding Danio_rerio
ENSDARG00000011283 protein_coding Danio_rerio
ENSDARG00000019207 abo ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) protein_coding Danio_rerio
ENSDARG00000025275 gbgt1l1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 1 protein_coding Danio_rerio
ENSDARG00000035555 gbgt1l3 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 3 protein_coding Danio_rerio
ENSDARG00000068503 gbgt1l4 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 4 protein_coding Danio_rerio
ENSDARG00000091936 protein_coding Danio_rerio
ENSDARG00000091944 protein_coding Danio_rerio
ENSDARG00000091969 protein_coding Danio_rerio
ENSDARG00000092718 gbgt1l2 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 2 protein_coding Danio_rerio
ENSMUSG00000015787 Abo ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase, transferase B, alpha 1-3-galactosyltransferase) protein_coding Mus_musculus

Loading