C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: spectrin alpha 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000019231 spna2 7955 + 21:11352584-11419552 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000102251 spna2-001 11352584-11419552 protein_coding
  ENSDART00000102253 spna2-002 11407506-11419552 protein_coding
  ENSDART00000102256 spna2-201 11352601-11419549 protein_coding
  ENSDART00000132524 spna2-003 11374977-11375971 retained_intron
  ENSDART00000140267 spna2-004 11383796-11389682 protein_coding
  ENSDART00000140667 spna2-005 11414063-11419236 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000102251ENSDART00000102253ENSDART00000102256
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000102251 70.550±8.67 24.082±5.71 5.218±0.00 1.498±0.00 9.602±0.00
ENSDART00000102253 36.963±0.00 40.861±39.09 5.127±1.20 N/A 10.815±0.00
ENSDART00000102256 N/A 8.138±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LY CIL_0002LY_0001 CGP 21:11352584-11427049

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0033268 IDA node of Ranvier
GO:0033270 IDA paranode region of axon
GO:0045162 IMP clustering of voltage-gated sodium channels

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000197694 SPTAN1 spectrin, alpha, non-erythrocytic 1 protein_coding Homo_sapiens
ENSMUSG00000057738 Sptan1 spectrin alpha, non-erythrocytic 1 protein_coding Mus_musculus

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