C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0002LY_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000019231-ENSDARG00000057635 | CGP | 7955 | 21:11352584-11427049  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000019231  (spna2)spectrin alpha 2 |
ENSDART00000102251 (spna2-001)
|
11352584-11419552 | protein_coding | |
|
ENSDART00000102253 (spna2-002)
|
11407506-11419552 | protein_coding | ||
|
ENSDART00000102256 (spna2-201)
|
11352601-11419549 | protein_coding | ||
|
ENSDART00000132524 (spna2-003)
|
11374977-11375971 | retained_intron | ||
|
ENSDART00000140267 (spna2-004)
|
11383796-11389682 | protein_coding | ||
|
ENSDART00000140667 (spna2-005)
|
11414063-11419236 | retained_intron | ||
|
ENSDARG00000057635 (dync2i1) dynein, cytoplasmic 2, intermediate chain 1 |
ENSDART00000080347 (dync2i1-001)
|
11419543-11427049 | protein_coding | |
|
ENSDART00000123238 (dync2i1-002)
|
11419555-11427049 | nonsense_mediated_decay | ||
| CIL_0002LY_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000197694-ENSG00000119333 | CGP | 9606 | 9:128552558-128656787 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000119333 (WDR34) WD repeat domain 34 |
ENST00000372715 (WDR34-005)
|
128633661-128656787 | protein_coding | |
|
ENST00000419989 (WDR34-001)
|
128636084-128656681 | protein_coding | ||
|
ENST00000451652 (WDR34-002)
|
128635918-128656699 | protein_coding | ||
|
ENST00000473486 (WDR34-003)
|
128635323-128637028 | processed_transcript | ||
|
ENST00000480613 (WDR34-006)
|
128635179-128656681 | processed_transcript | ||
|
ENST00000483181 (WDR34-004)
|
128634695-128636063 | processed_transcript | ||
|
ENSG00000197694 (SPTAN1) spectrin, alpha, non-erythrocytic 1 |
ENST00000358161 (SPTAN1-201)
|
128552558-128633665 | protein_coding | |
|
ENST00000372731 (SPTAN1-004)
|
128552590-128633662 | protein_coding | ||
|
ENST00000372739 (SPTAN1-005)
|
128552590-128633662 | protein_coding | ||
|
ENST00000461855 (SPTAN1-008)
|
128599964-128607989 | processed_transcript | ||
|
ENST00000472211 (SPTAN1-001)
|
128580956-128581946 | processed_transcript | ||
|
ENST00000475367 (SPTAN1-006)
|
128592984-128599704 | processed_transcript | ||
|
ENST00000476825 (SPTAN1-002)
|
128611901-128615806 | processed_transcript | ||
|
ENST00000491712 (SPTAN1-003)
|
128621178-128625855 | processed_transcript | ||
|
ENST00000497216 (SPTAN1-007)
|
128552605-128553336 | processed_transcript | ||
| CIL_0002LY_0003 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000057738-ENSMUSG00000039715 | CGP | 10090 | 2:29965560-30048881 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000039715 (Wdr34) WD repeat domain 34 |
ENSMUST00000113711 (Wdr34-001)
|
30031546-30048881 | protein_coding | |
|
ENSMUST00000139145 (Wdr34-004)
|
30031912-30032505 | retained_intron | ||
|
ENSMUST00000143892 (Wdr34-003)
|
30033794-30035046 | retained_intron | ||
|
ENSMUST00000146275 (Wdr34-002)
|
30047171-30048861 | processed_transcript | ||
|
ENSMUSG00000057738 (Sptan1) spectrin alpha, non-erythrocytic 1 |
ENSMUST00000046257 (Sptan1-003)
|
29965717-30031451 | protein_coding | |
|
ENSMUST00000095083 (Sptan1-002)
|
29965682-30031451 | protein_coding | ||
|
ENSMUST00000100225 (Sptan1-004)
|
29965680-30031445 | protein_coding | ||
|
ENSMUST00000113717 (Sptan1-001)
|
29965560-30031451 | protein_coding | ||
|
ENSMUST00000113719 (Sptan1-201)
|
29965560-30031448 | protein_coding | ||
|
ENSMUST00000113741 (Sptan1-006)
|
29965682-29983169 | protein_coding | ||
|
ENSMUST00000124494 (Sptan1-012)
|
30027564-30030517 | processed_transcript | ||
|
ENSMUST00000129241 (Sptan1-010)
|
30025593-30031096 | protein_coding | ||
|
ENSMUST00000131827 (Sptan1-007)
|
29991958-29994049 | retained_intron | ||
|
ENSMUST00000143918 (Sptan1-005)
|
29965677-29994037 | retained_intron | ||
|
ENSMUST00000149038 (Sptan1-008)
|
30001884-30008100 | retained_intron | ||
|
ENSMUST00000149846 (Sptan1-009)
|
30021821-30024983 | retained_intron | ||
|
ENSMUST00000152453 (Sptan1-011)
|
30027597-30030370 | retained_intron | ||
Expression Patterns
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