C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pre-B-cell leukemia transcription factor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000019717 pbx2 7955 + 16:51950122-51977260 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000004751 pbx2-201 51950122-51977030 protein_coding
  ENSDART00000130045 pbx2-202 51950211-51977259 protein_coding
  ENSDART00000154273 pbx2-002 51965500-51975269 protein_coding
  ENSDART00000157364 pbx2-001 51960868-51977260 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000004751ENSDART00000130045ENSDART00000157364
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000004751 0.697±0.00 N/A N/A 0.527±0.00 2.093±0.00
ENSDART00000130045 1.433±0.49 1.994±1.01 0.912±0.21 0.588±0.00 2.481±0.00
ENSDART00000157364 0.997±0.40 2.396±0.15 1.367±0.11 N/A 2.867±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002RT CIL_0002RT_0001 CGP 16:51935066-51977260

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007420 IMP brain development
GO:0030901 IGI midbrain development
GO:0043565 IEA sequence-specific DNA binding
GO:0048741 IGI skeletal muscle fiber development
GO:0060059 IGI embryonic retina morphogenesis in camera-type eye

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000204304 PBX2 pre-B-cell leukemia homeobox 2 protein_coding Homo_sapiens
ENSMUSG00000034673 Pbx2 pre B cell leukemia homeobox 2 protein_coding Mus_musculus

Loading