C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002RT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000086246-ENSDARG00000019717 CGP 7955 16:51935066-51977260
GeneTranscriptPositionBiotype
ENSDARG00000019717 (pbx2)
pre-B-cell leukemia transcription factor 2
ENSDART00000004751 (pbx2-201) 51950122-51977030 protein_coding
ENSDART00000130045 (pbx2-202) 51950211-51977259 protein_coding
ENSDART00000154273 (pbx2-002) 51965500-51975269 protein_coding
ENSDART00000157364 (pbx2-001) 51960868-51977260 protein_coding
ENSDARG00000086246 (GPSM3)
G-protein signaling modulator 3
ENSDART00000128293 (GPSM3-201) 51935066-51947619 protein_coding
CIL_0002RT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034786-ENSMUSG00000034673 CGP 10090 17:34589806-34597400
GeneTranscriptPositionBiotype
ENSMUSG00000034673 (Pbx2)
pre B cell leukemia homeobox 2
ENSMUST00000038149 (Pbx2-001) 34592263-34597400 protein_coding
ENSMUST00000173229 (Pbx2-004) 34595460-34596227 retained_intron
ENSMUST00000173328 (Pbx2-002) 34591266-34596607 protein_coding
ENSMUST00000174532 (Pbx2-003) 34593395-34594383 protein_coding
ENSMUST00000183827 (Pbx2-005) 34592734-34596416 protein_coding
ENSMUSG00000034786 (Gpsm3)
G-protein signalling modulator 3 (AGS3-like, C. elegans)
ENSMUST00000038244 (Gpsm3-001) 34589806-34591754 protein_coding
ENSMUST00000150924 (Gpsm3-002) 34590092-34591754 nonsense_mediated_decay
ENSMUST00000173772 (Gpsm3-004) 34590231-34591640 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002RT_0001ENSDARG00000019717ENSDART00000004751ENSDART00000130045ENSDART00000154273ENSDART00000157364ENSDARG00000086246ENSDART00000128293CIL_0002RT_0002ENSMUSG00000034673ENSMUST00000038149ENSMUST00000173229ENSMUST00000173328ENSMUST00000174532ENSMUST00000183827ENSMUSG00000034786ENSMUST00000038244ENSMUST00000150924ENSMUST00000173772
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002RT_0001ENSDARG00000019717ENSDART00000004751ENSDART00000130045ENSDART00000157364ENSDARG00000086246ENSDART00000128293CIL_0002RT_0002ENSMUSG00000034673ENSMUST00000038149ENSMUST00000173229ENSMUST00000173328ENSMUST00000174532ENSMUST00000183827ENSMUSG00000034786ENSMUST00000038244ENSMUST00000150924ENSMUST00000173772
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000019717 ENSDART00000004751 N/A N/A N/A 0.697±0.00 N/A N/A N/A N/A 0.527±0.00 N/A 2.093±0.00 N/A N/A N/A
ENSDART00000130045 N/A N/A N/A 1.433±0.49 N/A N/A 1.994±1.01 0.912±0.21 0.588±0.00 N/A 2.481±0.00 N/A N/A N/A
ENSDART00000154273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000157364 N/A N/A N/A 0.997±0.40 N/A N/A 2.396±0.15 1.367±0.11 N/A N/A 2.867±0.00 N/A N/A N/A
ENSDARG00000086246 ENSDART00000128293 N/A N/A N/A 2.403±0.41 N/A N/A 3.297±0.56 13.683±0.94 0.283±0.00 N/A 1.960±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034673 ENSMUST00000038149 7.105±2.91 10.149±4.90 8.281±1.00 9.507±4.41 5.501±2.21 8.111±0.80 2.424±0.35 6.336±0.64 4.915±2.30 9.971±0.89 3.069±0.49 7.537±2.05 9.923±3.07 0.985±0.33
ENSMUST00000173229 N/A N/A N/A 16.167±0.00 N/A N/A N/A N/A 6.021±0.00 N/A N/A 16.722±0.00 N/A N/A
ENSMUST00000173328 6.955±1.87 N/A 5.339±0.05 16.096±4.06 6.449±1.31 6.673±0.84 3.828±1.18 6.811±2.01 5.186±2.67 12.546±2.38 2.228±0.78 7.062±2.61 13.467±7.68 2.058±0.63
ENSMUST00000174532 N/A 15.339±3.87 N/A N/A N/A 18.421±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183827 13.890±3.07 6.035±1.07 8.953±1.19 12.256±0.99 12.044±2.02 13.023±0.76 2.911±0.00 6.730±0.32 5.847±2.53 12.739±0.85 2.231±0.00 23.630±6.35 15.959±1.74 2.036±0.42
ENSMUSG00000034786 ENSMUST00000038244 5.228±0.31 2.578±0.44 4.704±0.00 N/A 15.969±5.62 5.183±0.09 1.860±0.00 4.677±0.50 4.540±2.34 10.885±0.31 3.126±0.00 N/A N/A N/A
ENSMUST00000150924 N/A N/A N/A N/A 10.205±0.50 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173772 N/A N/A N/A N/A 14.577±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

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