C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collagen, type I, alpha 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000020007 col1a2 7955 + 19:41943847-41963606 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000042990 col1a2-201 41943847-41962955 protein_coding
  ENSDART00000144544 col1a2-001 41943847-41963606 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000042990ENSDART00000144544
Transcript ID Brain Heart Kidney Muscle
ENSDART00000042990 1.236±0.33 9.355±7.41 18.498±5.60 49.654±0.00
ENSDART00000144544 0.643±0.09 3.640±2.50 15.246±6.62 12.670±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004SO CIL_0004SO_0001 CGP 19:41943847-41994850

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005201 IEA extracellular matrix structural constituent
GO:0005581 IEA collagen
GO:0009612 IDA response to mechanical stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000164692 COL1A2 collagen, type I, alpha 2 protein_coding Homo_sapiens
ENSMUSG00000029661 Col1a2 collagen, type I, alpha 2 protein_coding Mus_musculus

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