| Transcript ID | Brain | Heart | Kidney | Muscle |
|---|---|---|---|---|
| ENSDART00000144544 | 0.643±0.09 | 3.640±2.50 | 15.246±6.62 | 12.670±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | collagen, type I, alpha 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSDART00000144544  |
col1a2-001 |
ENSDARG00000020007 |
7955 | + |
19:41943847-41963606  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004SO | CIL_0004SO_0001 | CGP | 19:41943847-41994850 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005201 | IEA | extracellular matrix structural constituent |
| GO:0005581 | IEA | collagen |
| GO:0009612 | IDA | response to mechanical stimulus |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000031668
|
Col1a2-001 | protein_coding | Mus_musculus | 0 | 390 |
|
ENST00000225964
|
COL1A1-001 | protein_coding | Homo_sapiens | 0 | 217 |
|
ENST00000297268
|
COL1A2-001 | protein_coding | Homo_sapiens | 0 | 1101 |
|
ENST00000337299
|
COL2A1-008 | protein_coding | Homo_sapiens | 0 | 254 |
|
ENST00000380518
|
COL2A1-001 | protein_coding | Homo_sapiens | 0 | 254 |
|
ENST00000464916
|
COL1A2-003 | retained_intron | Homo_sapiens | 0 | 403 |
|
ENST00000481570
|
COL1A2-002 | retained_intron | Homo_sapiens | 0 | 339 |
|
ENST00000493991
|
COL2A1-007 | processed_transcript | Homo_sapiens | 0 | 254 |
|
ENST00000510710
|
COL1A1-018 | retained_intron | Homo_sapiens | 9e-19 | 99 |
|
ENST00000620463
|
COL1A2-201 | protein_coding | Homo_sapiens | 0 | 1101 |
