C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein S18
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000020153 rps18 7955 - 19:18309520-18318937 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000017975 rps18-001 18309520-18318937 protein_coding
  ENSDART00000131839 rps18-005 18309669-18318904 protein_coding
  ENSDART00000134350 rps18-004 18317346-18318426 retained_intron
  ENSDART00000142769 rps18-002 18309669-18318885 protein_coding
  ENSDART00000143134 rps18-003 18309668-18318864 protein_coding
  ENSDART00000151480 rps18-006 18309669-18318427 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000017975ENSDART00000131839ENSDART00000134350ENSDART00000142769ENSDART00000143134
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000017975 74.824±73.34 995.855±252.79 204.782±285.81 291.877±0.00 307.578±0.00
ENSDART00000131839 93.988±0.00 N/A 543.200±0.00 175.032±0.00 229.550±0.00
ENSDART00000134350 0.806±0.00 N/A 0.701±0.23 N/A N/A
ENSDART00000142769 29.568±26.81 470.831±171.73 364.135±0.00 N/A 176.487±0.00
ENSDART00000143134 N/A N/A 1.012±0.32 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007AA CIL_0007AA_0001 CGP 19:18309520-18340857

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005737 IEA cytoplasm
GO:0005829 IBA cytosol
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0007275 IEA multicellular organismal development
GO:0015935 IBA small ribosomal subunit
GO:0019843 IEA rRNA binding
GO:0030529 IEA ribonucleoprotein complex
GO:0042254 IBA ribosome biogenesis
GO:0051726 IMP regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000231500 RPS18 ribosomal protein S18 protein_coding Homo_sapiens
ENSMUSG00000008668 Rps18 ribosomal protein S18 protein_coding Mus_musculus
ENSMUSG00000057657 Rps18-ps3 ribosomal protein S18, pseudogene 3 protein_coding Mus_musculus
ENSMUSG00000069117 Gm10260 predicted gene 10260 protein_coding Mus_musculus

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