C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0007AA_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000020153-ENSDARG00000009175 | CGP | 7955 | 19:18309520-18340857  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000009175  (vps52)vacuolar protein sorting 52 (yeast) |
ENSDART00000047190 (vps52-001)
|
18319012-18340857 | protein_coding | |
|
ENSDART00000147747 (vps52-003)
|
18319214-18328702 | retained_intron | ||
|
ENSDARG00000020153 (rps18) ribosomal protein S18 |
ENSDART00000017975 (rps18-001)
|
18309520-18318937 | protein_coding | |
|
ENSDART00000131839 (rps18-005)
|
18309669-18318904 | protein_coding | ||
|
ENSDART00000134350 (rps18-004)
|
18317346-18318426 | retained_intron | ||
|
ENSDART00000142769 (rps18-002)
|
18309669-18318885 | protein_coding | ||
|
ENSDART00000143134 (rps18-003)
|
18309668-18318864 | protein_coding | ||
|
ENSDART00000151480 (rps18-006)
|
18309669-18318427 | protein_coding | ||
| CIL_0007AA_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000008668-ENSMUSG00000024319 | CGP | 10090 | 17:33951999-33966984 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000008668 (Rps18) ribosomal protein S18 |
ENSMUST00000008812 (Rps18-001)
|
33951999-33955717 | protein_coding | |
|
ENSMUST00000172550 (Rps18-007)
|
33955519-33956001 | processed_transcript | ||
|
ENSMUST00000172799 (Rps18-002)
|
33952000-33954490 | processed_transcript | ||
|
ENSMUST00000173323 (Rps18-013)
|
33952004-33952541 | retained_intron | ||
|
ENSMUST00000174175 (Rps18-005)
|
33952000-33955660 | retained_intron | ||
|
ENSMUST00000174609 (Rps18-006)
|
33951999-33955663 | protein_coding | ||
|
ENSMUST00000174620 (Rps18-012)
|
33952269-33955653 | retained_intron | ||
|
ENSMUST00000174662 (Rps18-003)
|
33954825-33955660 | retained_intron | ||
|
ENSMUST00000174745 (Rps18-011)
|
33951999-33955212 | processed_transcript | ||
|
ENSMUST00000174758 (Rps18-008)
|
33951999-33952689 | retained_intron | ||
|
ENSMUSG00000024319 (Vps52) vacuolar protein sorting 52 (yeast) |
ENSMUST00000025178 (Vps52-001)
|
33955812-33966984 | protein_coding | |
|
ENSMUST00000172558 (Vps52-004)
|
33961111-33962821 | retained_intron | ||
|
ENSMUST00000173196 (Vps52-007)
|
33955915-33965973 | protein_coding | ||
|
ENSMUST00000173318 (Vps52-005)
|
33958057-33960475 | retained_intron | ||
|
ENSMUST00000173445 (Vps52-003)
|
33959009-33960504 | retained_intron | ||
|
ENSMUST00000174588 (Vps52-006)
|
33962389-33966269 | retained_intron | ||
|
ENSMUSG00000084601 (Gm23111) predicted gene, 23111 |
ENSMUST00000122652 (Gm23111-201)
|
33959663-33959767 | snRNA | |
Expression Patterns
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