C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: poly(A) binding protein, cytoplasmic 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000051732 Pabpc2 10090 + 18:39773497-39776082 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000063219 Pabpc2-001 39773497-39776082 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000063219
Transcript ID Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000063219 0.027±0.00 0.044±0.03 0.067±0.03 0.007±0.00 0.016±0.00 0.032±0.00 0.006±0.01 265.666±42.56

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005925 IEA focal adhesion
GO:0006378 TAS mRNA polyadenylation
GO:0008022 IEA protein C-terminus binding
GO:0008143 ISS poly(A) binding
GO:0008266 IEA poly(U) RNA binding
GO:0010494 IEA cytoplasmic stress granule
GO:0016020 IEA membrane
GO:0030529 IEA ribonucleoprotein complex
GO:0036464 IEA cytoplasmic ribonucleoprotein granule
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome
GO:0071013 IEA catalytic step 2 spliceosome
GO:2000623 IEA negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017219 pabpc1a poly A binding protein, cytoplasmic 1 a protein_coding Danio_rerio
ENSDARG00000021140 pabpc1b poly A binding protein, cytoplasmic 1 b protein_coding Danio_rerio
ENSG00000070756 PABPC1 poly(A) binding protein, cytoplasmic 1 protein_coding Homo_sapiens

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