C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000QH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000021735-ENSDARG00000068157 CGP 7955 5:30934886-31153219
GeneTranscriptPositionBiotype
ENSDARG00000021735 (cacna1ba)
calcium channel, voltage-dependent, N type, alpha 1B subunit, a 		ENSDART00000047719 (cacna1ba-001) 30934886-31126735 protein_coding
ENSDART00000141154 (cacna1ba-002) 30934886-31126735 protein_coding
ENSDARG00000068157 (ehmt1a)
euchromatic histone-lysine N-methyltransferase 1a 		ENSDART00000098364 (ehmt1a-201) 31129691-31151028 protein_coding
ENSDART00000125175 (ehmt1a-202) 31129594-31153219 protein_coding
ENSDART00000126018 (ehmt1a-001) 31129619-31153179 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0000QH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000004113-ENSMUSG00000036893 CGP 10090 2:24603887-24919609
GeneTranscriptPositionBiotype
ENSMUSG00000004113 (Cacna1b)
calcium channel, voltage-dependent, N type, alpha 1B subunit 		ENSMUST00000041342 (Cacna1b-002) 24606570-24763047 protein_coding
ENSMUST00000070864 (Cacna1b-001) 24603887-24763152 protein_coding
ENSMUST00000100348 (Cacna1b-201) 24606375-24763047 protein_coding
ENSMUST00000102939 (Cacna1b-004) 24603894-24763129 protein_coding
ENSMUST00000114447 (Cacna1b-003) 24606570-24763047 protein_coding
ENSMUST00000124183 (Cacna1b-005) 24679500-24685868 protein_coding
ENSMUST00000125798 (Cacna1b-008) 24609932-24637479 processed_transcript
ENSMUST00000131861 (Cacna1b-006) 24606379-24607534 processed_transcript
ENSMUST00000133892 (Cacna1b-009) 24607991-24618321 protein_coding
ENSMUST00000155356 (Cacna1b-007) 24622599-24632024 protein_coding
ENSMUSG00000036893 (Ehmt1)
euchromatic histone methyltransferase 1 		ENSMUST00000046227 (Ehmt1-201) 24790795-24919590 protein_coding
ENSMUST00000091348 (Ehmt1-002) 24791214-24919591 protein_coding
ENSMUST00000102938 (Ehmt1-001) 24790769-24919609 protein_coding
ENSMUST00000114418 (Ehmt1-202) 24790795-24891703 protein_coding
ENSMUST00000114432 (Ehmt1-203) 24790795-24919590 protein_coding
ENSMUST00000134775 (Ehmt1-004) 24791143-24806351 processed_transcript
ENSMUST00000138805 (Ehmt1-011) 24806214-24825384 processed_transcript
ENSMUST00000139000 (Ehmt1-005) 24835102-24919607 processed_transcript
ENSMUST00000144672 (Ehmt1-012) 24806328-24807282 processed_transcript
ENSMUST00000147147 (Ehmt1-003) 24791143-24884526 protein_coding
ENSMUST00000150379 (Ehmt1-006) 24863893-24919598 protein_coding
ENSMUST00000150836 (Ehmt1-009) 24824965-24852732 processed_transcript
ENSMUST00000152161 (Ehmt1-007) 24863296-24919601 protein_coding
ENSMUST00000152325 (Ehmt1-008) 24848027-24877516 protein_coding
ENSMUST00000152636 (Ehmt1-010) 24806270-24839591 processed_transcript
ENSMUSG00000083973 (Gm13459)
predicted gene 13459 		ENSMUST00000121558 (Gm13459-001) 24674701-24675346 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000QH_0001ENSDARG00000021735ENSDART00000047719ENSDART00000141154ENSDARG00000068157ENSDART00000098364ENSDART00000125175ENSDART00000126018CIL_0000QH_0002ENSMUSG00000004113ENSMUST00000041342ENSMUST00000070864ENSMUST00000100348ENSMUST00000102939ENSMUST00000114447ENSMUST00000124183ENSMUST00000125798ENSMUST00000131861ENSMUST00000133892ENSMUST00000155356ENSMUSG00000036893ENSMUST00000046227ENSMUST00000091348ENSMUST00000102938ENSMUST00000114418ENSMUST00000114432ENSMUST00000134775ENSMUST00000138805ENSMUST00000139000ENSMUST00000144672ENSMUST00000147147ENSMUST00000150379ENSMUST00000150836ENSMUST00000152161ENSMUST00000152325ENSMUST00000152636ENSMUSG00000083973ENSMUST00000121558
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000QH_0001ENSDARG00000021735ENSDART00000047719ENSDART00000141154ENSDARG00000068157ENSDART00000098364ENSDART00000125175ENSDART00000126018CIL_0000QH_0002ENSMUSG00000004113ENSMUST00000041342ENSMUST00000070864ENSMUST00000100348ENSMUST00000102939ENSMUST00000114447ENSMUST00000125798ENSMUST00000131861ENSMUST00000133892ENSMUSG00000036893ENSMUST00000046227ENSMUST00000091348ENSMUST00000102938ENSMUST00000114432ENSMUST00000134775ENSMUST00000147147ENSMUST00000152325ENSMUSG00000083973ENSMUST00000121558
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000021735 ENSDART00000047719 N/A N/A N/A N/A N/A N/A N/A 0.082±0.00 0.011±0.00 N/A N/A N/A N/A N/A
ENSDART00000141154 N/A N/A N/A N/A N/A N/A 0.021±0.00 N/A N/A N/A 0.131±0.00 N/A N/A N/A
ENSDARG00000068157 ENSDART00000098364 N/A N/A N/A 1.501±0.90 N/A N/A 2.951±1.04 N/A N/A N/A 0.154±0.00 N/A N/A N/A
ENSDART00000125175 N/A N/A N/A 1.721±0.77 N/A N/A 2.458±0.43 6.747±0.89 0.140±0.00 N/A N/A N/A N/A N/A
ENSDART00000126018 N/A N/A N/A 1.553±0.00 N/A N/A 1.321±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004113 ENSMUST00000041342 0.018±0.01 0.203±0.01 N/A N/A 0.160±0.01 0.908±0.41 0.023±0.00 0.007±0.00 N/A N/A 0.009±0.00 0.023±0.01 0.219±0.14 0.228±0.16
ENSMUST00000070864 N/A 0.473±0.24 N/A N/A 0.070±0.00 N/A 0.046±0.00 0.011±0.00 0.013±0.00 N/A 0.006±0.00 0.026±0.02 0.033±0.00 N/A
ENSMUST00000100348 0.014±0.00 0.468±0.00 0.070±0.00 N/A 0.158±0.07 1.192±0.01 N/A N/A 0.004±0.00 0.112±0.00 0.010±0.00 0.019±0.00 N/A 0.287±0.07
ENSMUST00000102939 0.044±0.00 0.197±0.00 0.101±0.03 8.781±4.45 0.119±0.02 0.840±0.35 N/A 0.060±0.01 0.123±0.00 0.173±0.03 0.026±0.00 0.029±0.02 0.128±0.06 0.271±0.00
ENSMUST00000114447 0.017±0.01 N/A N/A 5.168±0.00 0.153±0.01 0.412±0.00 0.022±0.00 0.006±0.00 N/A N/A 0.007±0.00 0.022±0.01 0.264±0.19 0.093±0.00
ENSMUST00000124183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125798 0.056±0.00 N/A N/A N/A 0.332±0.00 N/A N/A 0.312±0.07 N/A N/A 0.054±0.01 N/A N/A N/A
ENSMUST00000131861 N/A 2.108±0.00 N/A N/A 1.379±0.00 N/A N/A 0.034±0.00 N/A 0.631±0.04 0.180±0.02 0.172±0.08 N/A N/A
ENSMUST00000133892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.162±0.11 N/A N/A
ENSMUST00000155356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000036893 ENSMUST00000046227 N/A N/A N/A N/A N/A N/A N/A N/A 1.241±0.00 N/A 0.853±0.28 N/A 2.087±0.75 N/A
ENSMUST00000091348 8.721±4.86 4.568±1.49 2.276±0.00 2.448±0.00 5.752±1.25 7.084±2.74 2.963±0.56 3.811±1.14 2.292±1.02 6.340±0.41 1.302±0.52 11.618±3.49 2.021±0.33 1.300±0.56
ENSMUST00000102938 1.626±0.00 N/A 5.258±0.31 21.874±9.41 N/A N/A 1.525±0.55 1.482±0.01 2.546±0.93 2.087±0.13 0.897±0.20 4.817±1.18 3.622±0.10 0.664±0.04
ENSMUST00000114418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000114432 N/A N/A 2.968±0.00 6.152±0.37 N/A N/A N/A N/A 1.314±0.31 N/A 1.454±0.34 6.300±2.21 2.940±1.56 0.740±0.25
ENSMUST00000134775 14.665±6.16 10.372±3.98 8.173±1.12 46.935±26.97 16.603±6.67 11.266±3.86 6.664±1.82 7.920±1.43 5.515±1.72 12.438±3.32 1.354±0.00 21.430±4.70 6.364±0.54 3.325±0.28
ENSMUST00000138805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147147 N/A N/A N/A 4.650±0.00 3.631±0.00 N/A N/A N/A 0.864±0.00 N/A N/A N/A N/A N/A
ENSMUST00000150379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152325 N/A N/A N/A 30.224±0.00 N/A N/A N/A N/A N/A N/A N/A 63.013±0.00 41.067±9.68 17.163±0.00
ENSMUST00000152636 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000083973 ENSMUST00000121558 N/A N/A N/A 0.316±0.27 N/A 0.473±0.00 N/A N/A N/A N/A N/A N/A 0.010±0.00 0.062±0.00

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