C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: fragile X mental retardation, autosomal homolog 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000022968 fxr1 7955 - 22:40528447-40551116 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000104478 fxr1-001 40528447-40551116 protein_coding
  ENSDART00000148474 fxr1-004 40528918-40531689 retained_intron
  ENSDART00000149482 fxr1-003 40528447-40551054 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000104478ENSDART00000148474ENSDART00000149482
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000104478 9.381±0.83 14.410±7.78 3.786±3.73 2.712±0.00 N/A
ENSDART00000148474 9.164±1.10 15.367±0.00 5.918±3.67 N/A N/A
ENSDART00000149482 9.477±0.00 11.870±7.49 1.744±1.66 N/A 59.082±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MF CIL_0007MF_0003 UCNEbase 22:40035991-40568563

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001756 IMP somitogenesis
GO:0003723 IEA RNA binding
GO:0007507 IMP heart development
GO:0007519 IMP skeletal muscle tissue development
GO:0048747 IMP muscle fiber development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000114416 FXR1 fragile X mental retardation, autosomal homolog 1 protein_coding Homo_sapiens
ENSMUSG00000027680 Fxr1 fragile X mental retardation gene 1, autosomal homolog protein_coding Mus_musculus

Loading