C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fragile X mental retardation, autosomal homolog 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000104478 fxr1-001 ENSDARG00000022968 7955 - 22:40528447-40551116 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000104478
Transcript ID Brain Heart Kidney Liver
ENSDART00000104478 9.381±0.83 14.410±7.78 3.786±3.73 2.712±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MF CIL_0007MF_0003 UCNEbase 22:40035991-40568563

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001756 IMP somitogenesis
GO:0003723 IEA RNA binding
GO:0007507 IMP heart development
GO:0007519 IMP skeletal muscle tissue development
GO:0048747 IMP muscle fiber development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000250113 FXR2-001 protein_coding Homo_sapiens 0 399
ENST00000571079 FXR2-007 retained_intron Homo_sapiens 0.00000000000004 82

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