Source ID |
Type |
Tax ID |
Position |
SOX2 |
UCNEbase |
9606 |
3:180719005-182597004 |
Gene | Transcript | Position | Biotype |
ENSG00000114416 (FXR1)
fragile X mental retardation, autosomal homolog 1
|
ENST00000305586 (FXR1-007)
|
180912482-180977155 |
protein_coding |
ENST00000357559 (FXR1-001)
|
180912302-180982753 |
protein_coding |
ENST00000445140 (FXR1-005)
|
180912672-180977155 |
protein_coding |
ENST00000461044 (FXR1-016)
|
180957527-180963081 |
retained_intron |
ENST00000461801 (FXR1-020)
|
180933036-180935196 |
retained_intron |
ENST00000465551 (FXR1-013)
|
180868751-180949250 |
protein_coding |
ENST00000468861 (FXR1-004)
|
180912671-180976545 |
protein_coding |
ENST00000469882 (FXR1-015)
|
180868141-180949326 |
protein_coding |
ENST00000472339 (FXR1-006)
|
180912678-180976553 |
retained_intron |
ENST00000473375 (FXR1-021)
|
180951330-180954105 |
retained_intron |
ENST00000475315 (FXR1-002)
|
180912491-180976579 |
retained_intron |
ENST00000476672 (FXR1-018)
|
180957869-180970661 |
retained_intron |
ENST00000479176 (FXR1-010)
|
180912671-180948192 |
retained_intron |
ENST00000480918 (FXR1-008)
|
180915434-180976378 |
protein_coding |
ENST00000481383 (FXR1-022)
|
180970192-180971816 |
retained_intron |
ENST00000482125 (FXR1-019)
|
180968051-180976282 |
protein_coding |
ENST00000484042 (FXR1-012)
|
180915460-180948742 |
protein_coding |
ENST00000484790 (FXR1-014)
|
180868156-180948783 |
protein_coding |
ENST00000484958 (FXR1-011)
|
180912685-180949339 |
protein_coding |
ENST00000491062 (FXR1-003)
|
180912671-180976418 |
protein_coding |
ENST00000491674 (FXR1-009)
|
180912538-180927813 |
protein_coding |
ENST00000498658 (FXR1-017)
|
180957809-180968405 |
retained_intron |
ENSG00000145075 (CCDC39)
coiled-coil domain containing 39
|
ENST00000442201 (CCDC39-001)
|
180614588-180679500 |
protein_coding |
ENST00000471307 (CCDC39-003)
|
180661872-180870933 |
protein_coding |
ENST00000473854 (CCDC39-006)
|
180602858-180616652 |
protein_coding |
ENST00000476379 (CCDC39-002)
|
180614008-180737874 |
nonsense_mediated_decay |
ENST00000485055 (CCDC39-004)
|
180707589-180870178 |
processed_transcript |
ENST00000489868 (CCDC39-007)
|
180609503-180616617 |
protein_coding |
ENST00000495817 (CCDC39-005)
|
180708326-180871005 |
processed_transcript |
ENSG00000181449 (SOX2)
SRY (sex determining region Y)-box 2
|
ENST00000325404 (SOX2-001)
|
181711924-181714436 |
protein_coding |
ENSG00000205981 (DNAJC19)
DnaJ (Hsp40) homolog, subfamily C, member 19
|
ENST00000382564 (DNAJC19-001)
|
180983709-180989773 |
protein_coding |
ENST00000469657 (DNAJC19-004)
|
180983773-180989703 |
nonsense_mediated_decay |
ENST00000472504 (DNAJC19-005)
|
180987586-180989774 |
retained_intron |
ENST00000478723 (DNAJC19-007)
|
180985410-180989741 |
retained_intron |
ENST00000479269 (DNAJC19-009)
|
180984565-180989518 |
protein_coding |
ENST00000482363 (DNAJC19-002)
|
180987180-180989763 |
retained_intron |
ENST00000485675 (DNAJC19-003)
|
180986595-180989727 |
retained_intron |
ENST00000486355 (DNAJC19-006)
|
180984275-180989769 |
protein_coding |
ENST00000491873 (DNAJC19-008)
|
180984278-180989710 |
protein_coding |
ENSG00000213155 (RP11-252O18.3)
|
ENST00000462177 (RP11-252O18.3-001)
|
181866351-181867154 |
processed_pseudogene |
ENSG00000213157 (RP11-259P15.1)
|
ENST00000439549 (RP11-259P15.1-001)
|
180887677-180888075 |
processed_pseudogene |
ENSG00000235294 (RPL7AP25)
ribosomal protein L7a pseudogene 25
|
ENST00000423357 (RPL7AP25-001)
|
181505075-181505879 |
processed_pseudogene |
ENSG00000237806 (FAUP2)
FBR-MuSV-associated ubiquitously expressed (fox derived) pseudogene 2
|
ENST00000394301 (FAUP2-001)
|
181242345-181242901 |
processed_pseudogene |
ENSG00000239381 (RP11-4B14.3)
|
ENST00000470817 (RP11-4B14.3-002)
|
181534612-181535874 |
lincRNA |
ENST00000481234 (RP11-4B14.3-003)
|
181534177-181535874 |
lincRNA |
ENST00000482559 (RP11-4B14.3-001)
|
181534615-181535881 |
lincRNA |
ENSG00000239516 (FLYWCH1P1)
FLYWCH-type zinc finger 1 pseudogene 1
|
ENST00000460917 (FLYWCH1P1-001)
|
180827977-180829850 |
processed_pseudogene |
ENSG00000239805 (RP11-252O18.2)
|
ENST00000468802 (RP11-252O18.2-001)
|
181847526-181847885 |
processed_pseudogene |
ENSG00000241231 (RP11-275H4.1)
|
ENST00000460993 (RP11-275H4.1-001)
|
181421058-181442486 |
lincRNA |
ENSG00000241473 (RP11-259P15.3)
|
ENST00000420887 (RP11-259P15.3-001)
|
180820544-180821612 |
processed_pseudogene |
ENSG00000242012 (RP11-338L18.1)
|
ENST00000473893 (RP11-338L18.1-001)
|
182365147-182368256 |
lincRNA |
ENSG00000242068 (RP11-259P15.4)
|
ENST00000481241 (RP11-259P15.4-001)
|
180772750-180773914 |
processed_pseudogene |
ENSG00000242140 (RP11-262M14.2)
|
ENST00000487828 (RP11-262M14.2-001)
|
181146233-181146463 |
processed_pseudogene |
ENSG00000242512 (LINC01206)
long intergenic non-protein coding RNA 1206
|
ENST00000467313 (LINC01206-004)
|
181952374-181973345 |
lincRNA |
ENST00000474045 (LINC01206-002)
|
181952386-182003122 |
lincRNA |
ENST00000476815 (LINC01206-005)
|
181952404-181971879 |
lincRNA |
ENST00000482787 (LINC01206-001)
|
181952343-182010678 |
lincRNA |
ENST00000490001 (LINC01206-003)
|
181952373-182000262 |
lincRNA |
ENST00000596820 (LINC01206-007)
|
181952370-181972497 |
lincRNA |
ENST00000600750 (LINC01206-006)
|
181952349-181972497 |
lincRNA |
ENST00000608042 (LINC01206-009)
|
181971211-181973290 |
lincRNA |
ENST00000608102 (LINC01206-010)
|
181971214-181972470 |
lincRNA |
ENST00000608336 (LINC01206-012)
|
181967323-181972438 |
lincRNA |
ENST00000609052 (LINC01206-013)
|
181965983-181972492 |
lincRNA |
ENST00000609168 (LINC01206-008)
|
181971229-181973335 |
lincRNA |
ENST00000609852 (LINC01206-011)
|
181967858-181972470 |
lincRNA |
ENST00000610910 (LINC01206-016)
|
181952390-181963521 |
lincRNA |
ENST00000614303 (LINC01206-014)
|
181952378-181953734 |
lincRNA |
ENST00000619662 (LINC01206-015)
|
181952385-181957292 |
lincRNA |
ENSG00000242811 (RN7SL229P)
RNA, 7SL, cytoplasmic 229, pseudogene
|
ENST00000495651 (RN7SL229P-201)
|
180736405-180736703 |
misc_RNA |
ENSG00000244199 (RP11-139K4.4)
|
ENST00000498782 (RP11-139K4.4-001)
|
182460417-182461072 |
processed_pseudogene |
ENSG00000244247 (RP11-139K4.2)
|
ENST00000489016 (RP11-139K4.2-001)
|
182498264-182507124 |
lincRNA |
ENSG00000252257 (RN7SKP265)
RNA, 7SK small nuclear pseudogene 265
|
ENST00000516448 (RN7SKP265-201)
|
181968459-181968681 |
misc_RNA |
ENSG00000266317 (RN7SL703P)
RNA, 7SL, cytoplasmic 703, pseudogene
|
ENST00000578485 (RN7SL703P-201)
|
181813401-181813702 |
misc_RNA |