C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calcium channel, voltage-dependent, alpha 1F subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000023683 cacna1f 7955 + 8:23712661-23779257 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000041564 cacna1f-201 23712846-23779165 protein_coding
  ENSDART00000134151 cacna1f-001 23712661-23767555 protein_coding
  ENSDART00000136403 cacna1f-002 23769479-23779257 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000041564ENSDART00000134151ENSDART00000136403
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000041564 N/A 0.008±0.00 0.011±0.00 0.020±0.00 N/A
ENSDART00000134151 0.308±0.21 N/A 0.034±0.02 0.030±0.00 0.040±0.00
ENSDART00000136403 0.485±0.00 N/A N/A 0.062±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003V1 CIL_0003V1_0001 CGP 8:23712661-23800200

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005244 IEA voltage-gated ion channel activity
GO:0005245 IEA voltage-gated calcium channel activity
GO:0005262 IEA calcium channel activity
GO:0005891 IEA voltage-gated calcium channel complex
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0006816 IEA calcium ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0055085 IEA transmembrane transport
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000102001 CACNA1F calcium channel, voltage-dependent, L type, alpha 1F subunit protein_coding Homo_sapiens
ENSMUSG00000031142 Cacna1f calcium channel, voltage-dependent, alpha 1F subunit protein_coding Mus_musculus

Loading