C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: calcium channel, voltage-dependent, alpha 1F subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000134151 cacna1f-001 ENSDARG00000023683 7955 + 8:23712661-23767555 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverMuscleENSDART00000134151
Transcript ID Brain Kidney Liver Muscle
ENSDART00000134151 0.308±0.21 0.034±0.02 0.030±0.00 0.040±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003V1 CIL_0003V1_0001 CGP 8:23712661-23800200

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075591 Cacna1c-024 protein_coding Mus_musculus 0 315
ENSMUST00000078320 Cacna1c-004 protein_coding Mus_musculus 0 315
ENSMUST00000112249 Cacna1d-201 protein_coding Mus_musculus 0 388
ENSMUST00000112250 Cacna1d-202 protein_coding Mus_musculus 0 388
ENSMUST00000112790 Cacna1c-005 protein_coding Mus_musculus 0 315
ENSMUST00000186889 Cacna1c-001 protein_coding Mus_musculus 0 315
ENSMUST00000187474 Cacna1c-008 protein_coding Mus_musculus 0 315
ENSMUST00000187940 Cacna1c-002 protein_coding Mus_musculus 0 315
ENSMUST00000190285 Cacna1c-007 protein_coding Mus_musculus 0 315
ENST00000362061 CACNA1S-001 protein_coding Homo_sapiens 6.00036e-42 178
ENST00000367338 CACNA1S-002 protein_coding Homo_sapiens 6.00036e-42 178
ENST00000399603 CACNA1C-011 protein_coding Homo_sapiens 0 396
ENST00000399617 CACNA1C-013 protein_coding Homo_sapiens 0 396
ENST00000399634 CACNA1C-012 protein_coding Homo_sapiens 0 396
ENST00000399641 CACNA1C-010 protein_coding Homo_sapiens 0 396
ENST00000406454 CACNA1C-031 protein_coding Homo_sapiens 0 396
ENST00000491104 CACNA1C-014 processed_transcript Homo_sapiens 0 211
ENST00000613940 CACNA1C-201 protein_coding Homo_sapiens 0 350
ENST00000620878 CACNA1C-204 protein_coding Homo_sapiens 0 350

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