C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: T-box 5a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000024894 tbx5a 7955 + 5:75451438-75476894 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000037681 tbx5a-201 75451438-75476894 protein_coding
  ENSDART00000037691 tbx5a-001 75451438-75476894 protein_coding
  ENSDART00000114947 tbx5a-002 75454973-75474627 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverMuscleENSDART00000037681ENSDART00000037691ENSDART00000114947
Transcript ID Heart Kidney Liver Muscle
ENSDART00000037681 13.619±0.00 0.069±0.00 N/A 0.051±0.00
ENSDART00000037691 14.553±0.00 0.068±0.00 N/A 0.051±0.00
ENSDART00000114947 N/A 0.084±0.00 0.057±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004YZ CIL_0004YZ_0001 CGP 5:75416715-75476894

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001947 IMP heart looping
GO:0003007 IGI heart morphogenesis
GO:0003143 IMP embryonic heart tube morphogenesis
GO:0003190 IMP atrioventricular valve formation
GO:0003294 IMP atrial ventricular junction remodeling
GO:0003342 IMP proepicardium development
GO:0003344 IMP pericardium morphogenesis
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IMP transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0007507 IGI heart development
GO:0009887 IMP organ morphogenesis
GO:0015629 IPI actin cytoskeleton
GO:0033339 IMP pectoral fin development
GO:0035050 IMP embryonic heart tube development
GO:0035118 IMP embryonic pectoral fin morphogenesis
GO:0043565 IDA sequence-specific DNA binding
GO:0045893 IDA positive regulation of transcription, DNA-dependent
GO:0055007 IGI cardiac muscle cell differentiation
GO:0060174 IMP limb bud formation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000089225 TBX5 T-box 5 protein_coding Homo_sapiens
ENSMUSG00000018263 Tbx5 T-box 5 protein_coding Mus_musculus

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