C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: T-box 5a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000037691 tbx5a-001 ENSDARG00000024894 7955 + 5:75451438-75476894 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyMuscleENSDART00000037691
Transcript ID Heart Kidney Muscle
ENSDART00000037691 14.553±0.00 0.068±0.00 0.051±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004YZ CIL_0004YZ_0001 CGP 5:75416715-75476894

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001947 IMP heart looping
GO:0003007 IGI heart morphogenesis
GO:0003143 IMP embryonic heart tube morphogenesis
GO:0003190 IMP atrioventricular valve formation
GO:0003294 IMP atrial ventricular junction remodeling
GO:0003342 IMP proepicardium development
GO:0003344 IMP pericardium morphogenesis
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IMP transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0007507 IGI heart development
GO:0009887 IMP organ morphogenesis
GO:0015629 IPI actin cytoskeleton
GO:0033339 IMP pectoral fin development
GO:0035050 IMP embryonic heart tube development
GO:0035118 IMP embryonic pectoral fin morphogenesis
GO:0043565 IDA sequence-specific DNA binding
GO:0045893 IDA positive regulation of transcription, DNA-dependent
GO:0055007 IGI cardiac muscle cell differentiation
GO:0060174 IMP limb bud formation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029462 Tbx15-001 protein_coding Mus_musculus 0.0000000002 73
ENSMUST00000150756 Tbx15-003 processed_transcript Mus_musculus 0.00000000003 73
ENSMUST00000151606 Tbx15-002 processed_transcript Mus_musculus 0.00000000002 73

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