C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collagen, type XI, alpha 1a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000026165 col11a1a 7955 - 24:29686546-29815828 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000003503 col11a1a-001 29686546-29815828 protein_coding
  ENSDART00000042065 col11a1a-002 29687357-29815776 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000003503ENSDART00000042065
Transcript ID Brain Heart Kidney Muscle
ENSDART00000003503 0.354±0.00 0.025±0.01 0.095±0.00 N/A
ENSDART00000042065 N/A 0.046±0.00 N/A 0.040±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072Y CIL_00072Y_0002 CGP 24:29608812-29815828
CIL_00072Z CIL_00072Z_0001 CGP 24:29686546-29889548

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005201 IEA extracellular matrix structural constituent
GO:0005581 IEA collagen

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000060718 COL11A1 collagen, type XI, alpha 1 protein_coding Homo_sapiens
ENSMUSG00000027966 Col11a1 collagen, type XI, alpha 1 protein_coding Mus_musculus

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