C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neuropilin 1b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000027290 nrp1b 7955 + 2:43570359-43633838 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000098265 nrp1b-201 43570359-43629249 protein_coding
  ENSDART00000098267 nrp1b-202 43570359-43633838 protein_coding
  ENSDART00000142078 nrp1b-001 43570359-43594680 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverENSDART00000098265ENSDART00000098267
Transcript ID Heart Kidney Liver
ENSDART00000098265 N/A N/A 0.126±0.00
ENSDART00000098267 4.111±1.46 3.211±0.99 0.413±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000CM CIL_0000CM_0001 CGP 2:43306095-43633838
CIL_0000CP CIL_0000CP_0001 CGP 2:43570359-43684517

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0001570 IMP vasculogenesis
GO:0005021 IEA vascular endothelial growth factor-activated receptor activity
GO:0005515 IPI protein binding
GO:0007155 IEA cell adhesion
GO:0007411 IEA axon guidance
GO:0009887 IEA organ morphogenesis
GO:0016020 IEA membrane
GO:0017154 IEA semaphorin receptor activity
GO:0019838 IEA growth factor binding
GO:0030947 IMP regulation of vascular endothelial growth factor receptor signaling pathway
GO:0035767 IEA endothelial cell chemotaxis
GO:0038084 IEA vascular endothelial growth factor signaling pathway
GO:0048010 IEA vascular endothelial growth factor receptor signaling pathway
GO:0071526 IEA semaphorin-plexin signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000099250 NRP1 neuropilin 1 protein_coding Homo_sapiens
ENSMUSG00000025810 Nrp1 neuropilin 1 protein_coding Mus_musculus

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