C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000CP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000027290-ENSDARG00000022689 CGP 7955 2:43570359-43684517
GeneTranscriptPositionBiotype
ENSDARG00000022689 (itgb1b.2)
integrin, beta 1b.2 		ENSDART00000037808 (itgb1b.2-001) 43670284-43684517 protein_coding
ENSDARG00000027290 (nrp1b)
neuropilin 1b 		ENSDART00000098265 (nrp1b-201) 43570359-43629249 protein_coding
ENSDART00000098267 (nrp1b-202) 43570359-43633838 protein_coding
ENSDART00000142078 (nrp1b-001) 43570359-43594680 protein_coding
CIL_0000CP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025810-ENSMUSG00000025809 CGP 10090 8:128359073-128733200
GeneTranscriptPositionBiotype
ENSMUSG00000025809 (Itgb1)
integrin beta 1 (fibronectin receptor beta) 		ENSMUST00000090006 (Itgb1-001) 128685654-128733200 protein_coding
ENSMUST00000124826 (Itgb1-002) 128685757-128732617 nonsense_mediated_decay
ENSMUST00000135281 (Itgb1-003) 128685870-128710660 retained_intron
ENSMUST00000149116 (Itgb1-004) 128724333-128732389 protein_coding
ENSMUSG00000025810 (Nrp1)
neuropilin 1 		ENSMUST00000026917 (Nrp1-201) 128359073-128505462 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000CP_0001ENSDARG00000022689ENSDART00000037808ENSDARG00000027290ENSDART00000098265ENSDART00000098267ENSDART00000142078CIL_0000CP_0002ENSMUSG00000025809ENSMUST00000090006ENSMUST00000124826ENSMUST00000135281ENSMUST00000149116ENSMUSG00000025810ENSMUST00000026917
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000CP_0001ENSDARG00000022689ENSDART00000037808ENSDARG00000027290ENSDART00000098265ENSDART00000098267CIL_0000CP_0002ENSMUSG00000025809ENSMUST00000090006ENSMUST00000124826ENSMUSG00000025810ENSMUST00000026917
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000022689 ENSDART00000037808 N/A N/A N/A 0.083±0.04 N/A N/A 0.876±0.35 12.884±3.29 5.455±0.00 N/A 0.319±0.00 N/A N/A N/A
ENSDARG00000027290 ENSDART00000098265 N/A N/A N/A N/A N/A N/A N/A N/A 0.126±0.00 N/A N/A N/A N/A N/A
ENSDART00000098267 N/A N/A N/A N/A N/A N/A 4.111±1.46 3.211±0.99 0.413±0.00 N/A N/A N/A N/A N/A
ENSDART00000142078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025809 ENSMUST00000090006 46.059±2.45 19.752±3.35 202.938±7.81 20.019±9.56 29.303±6.14 25.956±10.49 55.361±4.25 39.253±7.40 33.005±11.58 63.201±8.28 33.396±1.17 49.274±28.51 101.331±22.52 5.018±0.96
ENSMUST00000124826 29.195±11.10 20.460±2.36 N/A 3.657±0.00 13.931±3.87 25.689±9.34 N/A 11.808±3.57 5.177±0.98 45.477±6.46 N/A 30.884±11.41 36.196±16.77 3.133±2.55
ENSMUST00000135281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149116 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000025810 ENSMUST00000026917 39.342±5.93 27.825±2.52 11.134±0.00 10.419±6.11 29.091±0.81 6.422±0.99 27.474±2.23 25.177±1.15 6.961±4.75 83.375±7.34 4.082±0.67 17.031±5.64 4.487±2.83 0.691±0.21

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