C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glutamate decarboxylase 1b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000027419 gad1b 7955 + 6:3642627-3676989 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000003008 gad1b-201 3642810-3676988 protein_coding
  ENSDART00000122348 gad1b-001 3642627-3676989 protein_coding
  ENSDART00000138185 gad1b-003 3649318-3665118 processed_transcript
  ENSDART00000140419 gad1b-002 3642653-3653104 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000003008ENSDART00000122348ENSDART00000138185ENSDART00000140419
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000003008 220.882±22.42 0.038±0.02 0.089±0.04 0.128±0.00 4.797±0.00
ENSDART00000122348 42.897±12.74 N/A N/A N/A 3.723±0.00
ENSDART00000138185 N/A 0.202±0.00 0.160±0.00 0.064±0.00 N/A
ENSDART00000140419 N/A N/A 0.465±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SB CIL_0003SB_0001 CGP 6:3631310-3676989
CIL_0003SC CIL_0003SC_0001 CGP 6:3642627-3689991

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004351 IEA glutamate decarboxylase activity
GO:0006520 IEA cellular amino acid metabolic process
GO:0009449 IEP gamma-aminobutyric acid biosynthetic process
GO:0016829 IEA lyase activity
GO:0016831 IEA carboxy-lyase activity
GO:0019752 IEA carboxylic acid metabolic process
GO:0030170 IEA pyridoxal phosphate binding
GO:0042136 IEP neurotransmitter biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000128683 GAD1 glutamate decarboxylase 1 (brain, 67kDa) protein_coding Homo_sapiens
ENSMUSG00000070880 Gad1 glutamate decarboxylase 1 protein_coding Mus_musculus
ENSMUSG00000090665 Gad1-ps glutamate decarboxylase 1, pseudogene protein_coding Mus_musculus

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