C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: paired box gene 2a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000028148 pax2a 7955 + 13:29994439-30027366 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000076992 pax2a-201 29994561-30027364 protein_coding
  ENSDART00000076998 pax2a-001 29994439-30027366 protein_coding
  ENSDART00000132004 pax2a-010 30002212-30026389 protein_coding
  ENSDART00000132064 pax2a-006 30001939-30009623 processed_transcript
  ENSDART00000133796 pax2a-008 29996755-30026118 protein_coding
  ENSDART00000134330 pax2a-005 29995065-30026118 protein_coding
  ENSDART00000134424 pax2a-009 29995065-30026118 protein_coding
  ENSDART00000138332 pax2a-002 29995065-30026118 protein_coding
  ENSDART00000139782 pax2a-004 29996755-30026118 protein_coding
  ENSDART00000141310 pax2a-003 29996755-30026118 protein_coding
  ENSDART00000144443 pax2a-007 29996755-30026118 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000076992ENSDART00000076998ENSDART00000132004ENSDART00000133796
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000076992 2.726±0.02 0.079±0.05 1.292±0.42 N/A N/A
ENSDART00000076998 3.890±0.00 N/A 2.813±0.00 0.029±0.00 N/A
ENSDART00000132004 N/A 0.076±0.00 N/A N/A 0.819±0.00
ENSDART00000133796 N/A 0.035±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KC CIL_0007KC_0004 UCNEbase 13:29815930-30059207

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0006355 IEA regulation of transcription, DNA-dependent

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000075891 PAX2 paired box 2 protein_coding Homo_sapiens
ENSMUSG00000004231 Pax2 paired box 2 protein_coding Mus_musculus

Loading