C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: paired box gene 2a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000076992 pax2a-201 ENSDARG00000028148 7955 + 13:29994561-30027364 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyENSDART00000076992
Transcript ID Brain Heart Kidney
ENSDART00000076992 2.726±0.02 0.079±0.05 1.292±0.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KC CIL_0007KC_0004 UCNEbase 13:29815930-30059207

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0006355 IEA regulation of transcription, DNA-dependent

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000004340 Pax2-201 protein_coding Mus_musculus 0 706
ENSMUST00000173346 Pax2-004 protein_coding Mus_musculus 0 381
ENSMUST00000174490 Pax2-001 protein_coding Mus_musculus 0 425
ENST00000355243 PAX2-001 protein_coding Homo_sapiens 0 418
ENST00000361791 PAX2-006 protein_coding Homo_sapiens 0 418
ENST00000370296 PAX2-002 protein_coding Homo_sapiens 7.00649e-45 187
ENST00000428433 PAX2-201 protein_coding Homo_sapiens 0 418

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