C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: paired box gene 2a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000076998 pax2a-001 ENSDARG00000028148 7955 + 13:29994439-30027366 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverENSDART00000076998
Transcript ID Brain Kidney Liver
ENSDART00000076998 3.890±0.00 2.813±0.00 0.029±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KC CIL_0007KC_0004 UCNEbase 13:29815930-30059207

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0006355 IEA regulation of transcription, DNA-dependent

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000004340 Pax2-201 protein_coding Mus_musculus 0 459
ENSMUST00000173346 Pax2-004 protein_coding Mus_musculus 0 451
ENSMUST00000174490 Pax2-001 protein_coding Mus_musculus 0 850
ENST00000355243 PAX2-001 protein_coding Homo_sapiens 0 891
ENST00000361791 PAX2-006 protein_coding Homo_sapiens 0 905
ENST00000370296 PAX2-002 protein_coding Homo_sapiens 7.00649e-45 187
ENST00000428433 PAX2-201 protein_coding Homo_sapiens 0 418

Loading