C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: integrin, beta 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000028507 itgb4 7955 + 8:13623711-13676538 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000029308 itgb4-001 13623711-13676538 protein_coding
  ENSDART00000138433 itgb4-002 13623974-13630480 retained_intron
  ENSDART00000148364 itgb4-003 13660116-13670529 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000029308
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000029308 0.831±0.53 0.241±0.10 1.054±0.00 0.041±0.00 0.935±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002K8 CIL_0002K8_0001 CGP 8:13581701-13676538

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0005515 IEA protein binding
GO:0007154 IEA cell communication
GO:0007155 IEA cell adhesion
GO:0007160 IEA cell-matrix adhesion
GO:0007229 IEA integrin-mediated signaling pathway
GO:0007275 IEA multicellular organismal development
GO:0008305 IEA integrin complex
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0031581 IEA hemidesmosome assembly
GO:0048870 IEA cell motility

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000132470 ITGB4 integrin, beta 4 protein_coding Homo_sapiens
ENSMUSG00000020758 Itgb4 integrin beta 4 protein_coding Mus_musculus

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