C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: MCM5 minichromosome maintenance deficient 5 (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000029688 mcm5 7955 + 3:26912773-26922329 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000045767 mcm5-201 26912773-26922321 protein_coding
  ENSDART00000109863 mcm5-202 26920154-26922329 protein_coding
  ENSDART00000124762 mcm5-001 26919548-26922322 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000045767ENSDART00000109863ENSDART00000124762
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000045767 0.377±0.31 0.571±0.00 2.423±1.69 0.920±0.00 3.258±0.00
ENSDART00000109863 N/A N/A 6.801±0.00 N/A N/A
ENSDART00000124762 N/A 0.259±0.00 0.492±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000557 CIL_000557_0001 CGP 3:26863439-26953764
CIL_0001PO CIL_0001PO_0001 CGP 3:26908016-26915504
CIL_0001PO CIL_0001PO_0002 CGP 3:26912754-26922329

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000902 IEA cell morphogenesis
GO:0005515 IEA protein binding
GO:0007049 IEA cell cycle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000126803 HSPA2 heat shock 70kDa protein 2 protein_coding Homo_sapiens
ENSG00000173110 HSPA6 heat shock 70kDa protein 6 (HSP70B') protein_coding Homo_sapiens
ENSG00000204388 HSPA1B heat shock 70kDa protein 1B protein_coding Homo_sapiens
ENSG00000204389 HSPA1A heat shock 70kDa protein 1A protein_coding Homo_sapiens
ENSG00000204390 HSPA1L heat shock 70kDa protein 1-like protein_coding Homo_sapiens
ENSMUSG00000007033 Hspa1l heat shock protein 1-like protein_coding Mus_musculus
ENSMUSG00000059970 Hspa2 heat shock protein 2 protein_coding Mus_musculus
ENSMUSG00000090877 Hspa1b heat shock protein 1B protein_coding Mus_musculus
ENSMUSG00000091971 Hspa1a heat shock protein 1A protein_coding Mus_musculus

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