C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001PO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000021924-ENSDARG00000092362 CGP 7955 3:26908016-26915504
GeneTranscriptPositionBiotype
ENSDARG00000021924 (hsp70.3)
heat shock cognate 70-kd protein, tandem duplicate 3 		ENSDART00000010477 (hsp70.3-001) 26908016-26911371 protein_coding
ENSDARG00000029688 (mcm5)
MCM5 minichromosome maintenance deficient 5 (S. cerevisiae) 		ENSDART00000045767 (mcm5-201) 26912773-26922321 protein_coding
ENSDART00000109863 (mcm5-202) 26920154-26922329 protein_coding
ENSDART00000124762 (mcm5-001) 26919548-26922322 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0001PO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000092362-ENSDARG00000029688 CGP 7955 3:26912754-26922329
GeneTranscriptPositionBiotype
ENSDARG00000029688 (mcm5)
MCM5 minichromosome maintenance deficient 5 (S. cerevisiae) 		ENSDART00000045767 (mcm5-201) 26912773-26922321 protein_coding
ENSDART00000109863 (mcm5-202) 26920154-26922329 protein_coding
ENSDART00000124762 (mcm5-001) 26919548-26922322 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0001PO_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000204389-ENSG00000204388 CGP 9606 6:31815464-31830255
GeneTranscriptPositionBiotype
ENSG00000204388 (HSPA1B)
heat shock 70kDa protein 1B 		ENST00000375650 (HSPA1B-001) 31827735-31830255 protein_coding
ENSG00000204389 (HSPA1A)
heat shock 70kDa protein 1A 		ENST00000375651 (HSPA1A-001) 31815464-31817946 protein_coding
ENST00000608703 (HSPA1A-002) 31815543-31817946 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0001PO_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000204390-ENSG00000204389 CGP 9606 6:31809619-31817946
GeneTranscriptPositionBiotype
ENSG00000204389 (HSPA1A)
heat shock 70kDa protein 1A 		ENST00000375651 (HSPA1A-001) 31815464-31817946 protein_coding
ENST00000608703 (HSPA1A-002) 31815543-31817946 protein_coding
ENSG00000204390 (HSPA1L)
heat shock 70kDa protein 1-like 		ENST00000375654 (HSPA1L-001) 31809619-31815065 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0001PO_0005 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000090877-ENSMUSG00000091971 CGP 10090 17:34956436-34972156
GeneTranscriptPositionBiotype
ENSMUSG00000090877 (Hspa1b)
heat shock protein 1B 		ENSMUST00000172753 (Hspa1b-001) 34956436-34959238 protein_coding
ENSMUSG00000091971 (Hspa1a)
heat shock protein 1A 		ENSMUST00000087328 (Hspa1a-001) 34969190-34972156 protein_coding
ENSMUSG00000092609 (Gm20481)
predicted gene 20481 		ENSMUST00000173680 (Gm20481-001) 34969912-34972136 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

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Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001PO_0001ENSDARG00000021924ENSDART00000010477ENSDARG00000029688ENSDART00000045767ENSDART00000109863ENSDART00000124762CIL_0001PO_0002ENSDARG00000029688ENSDART00000045767ENSDART00000109863ENSDART00000124762CIL_0001PO_0003ENSG00000204388ENST00000375650ENSG00000204389ENST00000375651ENST00000608703CIL_0001PO_0004ENSG00000204389ENST00000375651ENST00000608703ENSG00000204390ENST00000375654CIL_0001PO_0005ENSMUSG00000090877ENSMUST00000172753ENSMUSG00000091971ENSMUST00000087328ENSMUSG00000092609ENSMUST00000173680
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001PO_0001ENSDARG00000021924ENSDART00000010477ENSDARG00000029688ENSDART00000045767ENSDART00000109863ENSDART00000124762CIL_0001PO_0002ENSDARG00000029688ENSDART00000045767ENSDART00000109863ENSDART00000124762CIL_0001PO_0003ENSG00000204388ENST00000375650ENSG00000204389ENST00000375651ENST00000608703CIL_0001PO_0004ENSG00000204389ENST00000375651ENST00000608703ENSG00000204390ENST00000375654CIL_0001PO_0005ENSMUSG00000090877ENSMUST00000172753ENSMUSG00000091971ENSMUST00000087328ENSMUSG00000092609ENSMUST00000173680
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000021924 ENSDART00000010477 N/A N/A N/A 0.394±0.44 N/A N/A 0.514±0.54 0.024±0.00 1.898±0.00 N/A 2.907±0.00 N/A N/A N/A
ENSDARG00000029688 ENSDART00000045767 N/A N/A N/A 0.377±0.31 N/A N/A 0.571±0.00 2.423±1.69 0.920±0.00 N/A 3.258±0.00 N/A N/A N/A
ENSDART00000109863 N/A N/A N/A N/A N/A N/A N/A 6.801±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000124762 N/A N/A N/A N/A N/A N/A 0.259±0.00 0.492±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000029688 ENSDART00000045767 N/A N/A N/A 0.377±0.31 N/A N/A 0.571±0.00 2.423±1.69 0.920±0.00 N/A 3.258±0.00 N/A N/A N/A
ENSDART00000109863 N/A N/A N/A N/A N/A N/A N/A 6.801±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000124762 N/A N/A N/A N/A N/A N/A 0.259±0.00 0.492±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000204388 ENST00000375650 20.128±0.00 7.352±0.00 11.506±0.00 24.505±5.40 54.363±5.64 225.744±205.78 9.974±1.88 29.321±20.03 15.654±11.84 124.535±79.45 16.895±3.49 68.648±35.43 25.648±13.69 50.699±9.06
ENSG00000204389 ENST00000375651 N/A N/A 4.884±0.00 6.305±0.00 27.603±0.00 9.596±0.00 4.774±0.00 N/A 10.022±0.00 N/A 12.733±0.00 0.889±0.00 N/A N/A
ENST00000608703 18.757±0.00 10.593±0.00 12.267±0.00 17.100±1.69 40.181±4.23 181.336±166.45 18.944±5.76 47.558±27.34 18.252±8.14 124.580±82.17 14.450±2.49 26.414±16.26 27.954±2.63 33.223±8.42
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000204389 ENST00000375651 N/A N/A 4.884±0.00 6.305±0.00 27.603±0.00 9.596±0.00 4.774±0.00 N/A 10.022±0.00 N/A 12.733±0.00 0.889±0.00 N/A N/A
ENST00000608703 18.757±0.00 10.593±0.00 12.267±0.00 17.100±1.69 40.181±4.23 181.336±166.45 18.944±5.76 47.558±27.34 18.252±8.14 124.580±82.17 14.450±2.49 26.414±16.26 27.954±2.63 33.223±8.42
ENSG00000204390 ENST00000375654 0.781±0.00 1.559±0.00 0.219±0.00 1.165±0.44 0.567±0.03 1.324±1.11 0.399±0.06 0.728±0.29 0.343±0.18 0.428±0.24 1.122±0.16 1.397±0.85 0.957±0.20 31.771±9.19
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000090877 ENSMUST00000172753 4.521±2.07 9.873±3.65 38.594±7.90 1.674±0.42 13.303±6.26 10.770±0.83 0.747±0.42 9.047±0.59 1.336±0.49 8.777±5.68 0.891±0.52 13.538±5.10 7.389±3.14 1.471±1.32
ENSMUSG00000091971 ENSMUST00000087328 1.918±0.93 6.045±0.72 19.716±7.06 1.542±0.26 3.824±1.57 4.725±0.49 0.662±0.29 3.987±0.37 0.322±0.31 5.047±3.43 0.887±0.43 6.097±2.11 2.732±0.97 0.955±0.45
ENSMUSG00000092609 ENSMUST00000173680 1.964±0.81 8.206±2.82 8.213±0.00 3.315±0.00 2.661±0.80 4.821±0.57 0.790±0.07 4.444±0.80 0.244±0.13 6.054±3.11 1.809±0.77 5.786±0.56 4.601±1.57 0.848±0.15

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