C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MCM5 minichromosome maintenance deficient 5 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000045767 mcm5-201 ENSDARG00000029688 7955 + 3:26912773-26922321 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000045767
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000045767 0.377±0.31 0.571±0.00 2.423±1.69 0.920±0.00 3.258±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000557 CIL_000557_0001 CGP 3:26863439-26953764
CIL_0001PO CIL_0001PO_0001 CGP 3:26908016-26915504
CIL_0001PO CIL_0001PO_0002 CGP 3:26912754-26922329

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000902 IEA cell morphogenesis
GO:0005515 IEA protein binding
GO:0007049 IEA cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000007248 Hspa1l-001 protein_coding Mus_musculus 0 1197
ENSMUST00000087328 Hspa1a-001 protein_coding Mus_musculus 0 1352
ENSMUST00000172753 Hspa1b-001 protein_coding Mus_musculus 0 1363
ENST00000247207 HSPA2-201 protein_coding Homo_sapiens 0 1218
ENST00000375650 HSPA1B-001 protein_coding Homo_sapiens 0 1411
ENST00000375651 HSPA1A-001 protein_coding Homo_sapiens 0 1406
ENST00000375654 HSPA1L-001 protein_coding Homo_sapiens 0 1046
ENST00000383389 HSPA1A-002 protein_coding Homo_sapiens 0 1024
ENST00000383390 HSPA1L-001 protein_coding Homo_sapiens 0 1040
ENST00000391548 HSPA1B-001 protein_coding Homo_sapiens 0 1417
ENST00000391555 HSPA1B-001 protein_coding Homo_sapiens 0 1417
ENST00000394709 HSPA2-001 protein_coding Homo_sapiens 0 1218
ENST00000400040 HSPA1A-001 protein_coding Homo_sapiens 0 1406
ENST00000417199 HSPA1B-203 protein_coding Homo_sapiens 0 1411
ENST00000417601 HSPA1L-001 protein_coding Homo_sapiens 0 1046
ENST00000422919 HSPA1A-002 protein_coding Homo_sapiens 0 1024
ENST00000426095 HSPA1L-001 protein_coding Homo_sapiens 0 1040
ENST00000430065 HSPA1A-001 protein_coding Homo_sapiens 0 1406
ENST00000433487 HSPA1A-001 protein_coding Homo_sapiens 0 1411
ENST00000441618 HSPA1A-001 protein_coding Homo_sapiens 0 1406
ENST00000445736 HSPA1B-001 protein_coding Homo_sapiens 0 1411
ENST00000449876 HSPA1A-002 protein_coding Homo_sapiens 0 1024
ENST00000450744 HSPA1B-001 protein_coding Homo_sapiens 0 1411
ENST00000452298 HSPA1A-002 protein_coding Homo_sapiens 0 1029
ENST00000456772 HSPA1L-001 protein_coding Homo_sapiens 0 1040
ENST00000458062 HSPA1B-201 protein_coding Homo_sapiens 0 1417
ENST00000545241 HSPA1B-202 protein_coding Homo_sapiens 0 1417
ENST00000554883 HSPA2-004 processed_transcript Homo_sapiens 8e-21 104
ENST00000608703 HSPA1A-002 protein_coding Homo_sapiens 0 1029

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