C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAR-related orphan receptor A, paralog a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000031768 roraa 7955 + 25:34896334-35016527 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000121449 roraa-201 34896334-35011591 protein_coding
  ENSDART00000148537 roraa-001 34986538-35016527 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000121449ENSDART00000148537
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000121449 N/A N/A N/A 0.012±0.00 N/A
ENSDART00000148537 10.127±2.94 1.016±0.32 0.299±0.03 0.040±0.00 0.161±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005GZ CIL_0005GZ_0001 CGP 25:34896334-35055335

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0004879 IEA ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0008270 IEA zinc ion binding
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000069667 RORA RAR-related orphan receptor A protein_coding Homo_sapiens
ENSMUSG00000032238 Rora RAR-related orphan receptor alpha protein_coding Mus_musculus

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