C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: midkine-related growth factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000036036 mdka 7955 + 7:40558562-40569729 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000052318 mdka-001 40558562-40569729 protein_coding
  ENSDART00000124343 mdka-201 40565885-40569151 protein_coding
  ENSDART00000146635 mdka-002 40558564-40566659 protein_coding

Danio rerio EnsemblZv9

Genome
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Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000052318ENSDART00000124343
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000052318 34.206±10.60 7.234±3.49 2.576±0.79 0.297±0.00 2.252±0.00
ENSDART00000124343 64.935±17.06 32.109±3.06 6.009±0.00 0.089±0.00 6.663±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002US CIL_0002US_0001 CGP 7:40354309-40569729
CIL_0002LJ CIL_0002LJ_0001 CGP 7:40558562-40595563

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001841 IMP neural tube formation
GO:0008083 IEA growth factor activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000110492 MDK midkine (neurite growth-promoting factor 2) protein_coding Homo_sapiens
ENSMUSG00000027239 Mdk midkine protein_coding Mus_musculus

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