C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002US_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000014439-ENSDARG00000036036 CGP 7955 7:40354309-40569729
GeneTranscriptPositionBiotype
ENSDARG00000036036 (mdka)
midkine-related growth factor 		ENSDART00000052318 (mdka-001) 40558562-40569729 protein_coding
ENSDART00000124343 (mdka-201) 40565885-40569151 protein_coding
ENSDART00000146635 (mdka-002) 40558564-40566659 protein_coding
CIL_0002US_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000076025-ENSDARG00000020708 CGP 7955 25:8047966-8144262
GeneTranscriptPositionBiotype
ENSDARG00000020708 (mdkb)
midkine-related growth factor b 		ENSDART00000003042 (mdkb-001) 8135519-8144262 protein_coding
CIL_0002US_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000149091-ENSG00000110492 CGP 9606 11:46332905-46383837
GeneTranscriptPositionBiotype
ENSG00000110492 (MDK)
midkine (neurite growth-promoting factor 2) 		ENST00000359803 (MDK-001) 46381068-46383825 protein_coding
ENST00000395565 (MDK-201) 46381711-46383837 protein_coding
ENST00000395566 (MDK-005) 46381676-46383806 protein_coding
ENST00000395569 (MDK-004) 46381669-46383825 protein_coding
ENST00000405308 (MDK-006) 46380756-46383799 protein_coding
ENST00000407067 (MDK-002) 46381753-46383783 protein_coding
ENST00000441869 (MDK-007) 46380937-46382364 protein_coding
ENST00000481047 (MDK-009) 46381711-46382770 retained_intron
ENST00000489525 (MDK-003) 46381737-46383806 nonsense_mediated_decay
ENST00000490240 (MDK-008) 46381061-46382821 retained_intron
ENST00000533283 (MDK-012) 46381693-46383570 processed_transcript
ENST00000533952 (MDK-011) 46381207-46382736 protein_coding
ENST00000617138 (MDK-202) 46381655-46383837 protein_coding
ENSG00000149091 (DGKZ)
diacylglycerol kinase, zeta 		ENST00000318201 (DGKZ-024) 46347588-46380367 protein_coding
ENST00000343674 (DGKZ-001) 46332905-46380554 protein_coding
ENST00000421244 (DGKZ-023) 46347588-46379947 protein_coding
ENST00000454345 (DGKZ-002) 46361595-46380554 protein_coding
ENST00000456247 (DGKZ-022) 46347572-46380554 protein_coding
ENST00000524448 (DGKZ-013) 46367652-46371384 protein_coding
ENST00000524869 (DGKZ-018) 46374429-46375868 protein_coding
ENST00000524984 (DGKZ-007) 46345437-46380554 nonsense_mediated_decay
ENST00000525242 (DGKZ-012) 46338598-46368045 protein_coding
ENST00000525434 (DGKZ-014) 46361522-46367656 processed_transcript
ENST00000527211 (DGKZ-010) 46376520-46380551 retained_intron
ENST00000527674 (DGKZ-006) 46345434-46369175 retained_intron
ENST00000527903 (DGKZ-017) 46371725-46372897 retained_intron
ENST00000527911 (DGKZ-008) 46347463-46380282 protein_coding
ENST00000528173 (DGKZ-009) 46367315-46380553 retained_intron
ENST00000528615 (DGKZ-003) 46345403-46380110 protein_coding
ENST00000529660 (DGKZ-020) 46377148-46379568 processed_transcript
ENST00000529698 (DGKZ-021) 46375024-46377350 retained_intron
ENST00000531879 (DGKZ-004) 46345432-46379080 retained_intron
ENST00000532868 (DGKZ-005) 46345267-46380120 protein_coding
ENST00000532941 (DGKZ-019) 46377970-46378927 retained_intron
ENST00000533376 (DGKZ-016) 46347523-46371384 nonsense_mediated_decay
ENST00000534215 (DGKZ-015) 46361607-46368007 processed_transcript
ENST00000534802 (DGKZ-011) 46377968-46380551 retained_intron
ENSG00000264102 (MIR4688)
microRNA 4688 		ENST00000577966 (MIR4688-201) 46376402-46376484 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002US_0001ENSDARG00000036036ENSDART00000052318ENSDART00000124343ENSDART00000146635CIL_0002US_0002ENSDARG00000020708ENSDART00000003042CIL_0002US_0003ENSG00000110492ENST00000359803ENST00000395565ENST00000395566ENST00000395569ENST00000405308ENST00000407067ENST00000441869ENST00000481047ENST00000489525ENST00000490240ENST00000533283ENST00000533952ENST00000617138ENSG00000149091ENST00000318201ENST00000343674ENST00000421244ENST00000454345ENST00000456247ENST00000524448ENST00000524869ENST00000524984ENST00000525242ENST00000525434ENST00000527211ENST00000527674ENST00000527903ENST00000527911ENST00000528173ENST00000528615ENST00000529660ENST00000529698ENST00000531879ENST00000532868ENST00000532941ENST00000533376ENST00000534215ENST00000534802ENSG00000264102ENST00000577966
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002US_0001ENSDARG00000036036ENSDART00000052318ENSDART00000124343CIL_0002US_0002ENSDARG00000020708ENSDART00000003042CIL_0002US_0003ENSG00000110492ENST00000359803ENST00000395565ENST00000395566ENST00000395569ENST00000405308ENST00000489525ENST00000490240ENST00000533283ENST00000533952ENST00000617138ENSG00000149091ENST00000318201ENST00000421244ENST00000454345ENST00000456247ENST00000524869ENST00000524984ENST00000527211ENST00000527911ENST00000528173ENST00000528615ENST00000529698ENST00000532868ENSG00000264102ENST00000577966
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000036036 ENSDART00000052318 N/A N/A N/A 34.206±10.60 N/A N/A 7.234±3.49 2.576±0.79 0.297±0.00 N/A 2.252±0.00 N/A N/A N/A
ENSDART00000124343 N/A N/A N/A 64.935±17.06 N/A N/A 32.109±3.06 6.009±0.00 0.089±0.00 N/A 6.663±0.00 N/A N/A N/A
ENSDART00000146635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000020708 ENSDART00000003042 N/A N/A N/A 373.087±106.91 N/A N/A 12.763±6.81 1.553±1.15 0.336±0.00 N/A 11.057±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000110492 ENST00000359803 N/A N/A N/A N/A N/A N/A N/A N/A 0.534±0.00 N/A N/A N/A N/A N/A
ENST00000395565 N/A N/A N/A N/A N/A N/A 0.980±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000395566 20.349±0.00 5.879±0.00 N/A N/A 11.347±6.27 10.240±7.60 1.542±0.56 12.981±0.00 N/A 42.804±0.00 1.081±0.00 300.796±290.21 49.940±23.25 13.072±0.00
ENST00000395569 N/A N/A 1.260±0.00 N/A N/A N/A N/A N/A N/A N/A 2.210±0.00 N/A N/A N/A
ENST00000405308 5.516±0.00 3.489±0.00 N/A N/A 1.092±0.00 3.523±0.00 1.215±0.00 N/A 1.201±0.00 1.242±0.00 0.983±0.00 N/A 6.433±0.00 N/A
ENST00000407067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.674±0.00 N/A N/A
ENST00000490240 N/A N/A N/A N/A 3.448±0.00 N/A N/A N/A 0.520±0.00 N/A N/A 3.427±0.00 N/A N/A
ENST00000533283 12.484±0.00 12.793±0.00 N/A N/A 19.292±0.00 4.900±4.12 N/A 5.014±3.25 N/A 14.436±12.93 1.101±0.00 13.195±0.00 15.051±0.00 N/A
ENST00000533952 N/A N/A N/A N/A 3.636±0.00 N/A N/A 0.880±0.00 N/A N/A N/A 22.790±0.00 23.073±0.00 N/A
ENST00000617138 N/A 3.394±0.00 N/A N/A 7.861±0.00 7.997±0.00 N/A N/A 0.186±0.00 18.925±0.00 N/A N/A N/A N/A
ENSG00000149091 ENST00000318201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.796±0.00 5.943±0.00 N/A
ENST00000343674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421244 N/A N/A 1.577±0.00 17.700±0.00 3.646±0.00 N/A 0.605±0.00 0.610±0.00 0.848±0.00 N/A 3.664±1.06 0.735±0.00 N/A N/A
ENST00000454345 N/A N/A N/A N/A N/A N/A 2.027±1.80 N/A N/A N/A N/A N/A N/A 3.729±0.00
ENST00000456247 N/A N/A N/A 11.301±0.80 N/A N/A 0.322±0.00 3.012±0.00 0.703±0.00 0.746±0.00 N/A 6.773±1.12 11.251±1.53 4.444±0.00
ENST00000524448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 32.691±0.00 N/A N/A
ENST00000524984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.780±0.00 N/A
ENST00000525242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527211 N/A N/A N/A N/A N/A N/A N/A 0.081±0.00 N/A N/A N/A 2.000±0.00 N/A 2.160±0.00
ENST00000527674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527911 2.133±0.00 N/A N/A 16.111±0.00 N/A 1.123±0.00 N/A 2.399±0.00 N/A N/A 5.107±0.00 14.950±0.00 13.139±7.96 12.018±0.00
ENST00000528173 N/A 3.403±0.00 N/A N/A 0.541±0.00 N/A N/A 0.929±0.00 N/A 1.460±0.00 N/A N/A N/A N/A
ENST00000528615 2.655±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529698 N/A N/A N/A N/A N/A N/A N/A N/A 1.812±0.00 N/A N/A N/A N/A N/A
ENST00000531879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532868 N/A N/A N/A N/A N/A N/A 0.163±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000532941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000264102 ENST00000577966 0.396±0.00 0.398±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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