C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: high mobility group nucleosomal binding domain 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000036754 hmgn3 7955 - 23:31596667-31611386 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000053367 hmgn3-001 31596667-31611386 protein_coding
  ENSDART00000135620 hmgn3-002 31596690-31611368 protein_coding

Danio rerio EnsemblZv9

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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000053367ENSDART00000135620
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000053367 78.210±47.34 37.265±21.43 29.802±12.19 0.323±0.00 6.335±0.00
ENSDART00000135620 N/A 12.591±0.23 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000621 CIL_000621_0001 CGP 23:31510553-31611386
CIL_000626 CIL_000626_0001 CGP 23:31596667-31639371

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000785 IEA chromatin
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0031492 IEA nucleosomal DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000118418 HMGN3 high mobility group nucleosomal binding domain 3 protein_coding Homo_sapiens
ENSMUSG00000066456 Hmgn3 high mobility group nucleosomal binding domain 3 protein_coding Mus_musculus

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