C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: vesicle transport through interaction with t-SNAREs homolog 1B (yeast)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000039270 vti1b 7955 - 13:33264038-33278458 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000057379 vti1b-001 33264038-33278449 protein_coding
  ENSDART00000135955 vti1b-002 33264861-33278458 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000057379
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000057379 4.196±2.06 3.522±0.78 2.969±2.23 0.517±0.00 1.204±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001KL CIL_0001KL_0001 CGP 13:33248149-33278458
CIL_0001MK CIL_0001MK_0001 CGP 13:33264038-33289432

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006886 IEA intracellular protein transport
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000100568 VTI1B vesicle transport through interaction with t-SNAREs 1B protein_coding Homo_sapiens
ENSMUSG00000021124 Vti1b vesicle transport through interaction with t-SNAREs 1B protein_coding Mus_musculus

Loading