C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001KL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000039269-ENSDARG00000039270 CGP 7955 13:33248149-33278458
GeneTranscriptPositionBiotype
ENSDARG00000039269 (arg2)
arginase, type II
ENSDART00000057377 (arg2-001) 33248149-33257976 protein_coding
ENSDARG00000039270 (vti1b)
vesicle transport through interaction with t-SNAREs homolog 1B (yeast)
ENSDART00000057379 (vti1b-001) 33264038-33278449 protein_coding
ENSDART00000135955 (vti1b-002) 33264861-33278458 protein_coding
CIL_0001KL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000081181-ENSG00000100568 CGP 9606 14:67619798-67674831
GeneTranscriptPositionBiotype
ENSG00000100568 (VTI1B)
vesicle transport through interaction with t-SNAREs 1B
ENST00000216456 (VTI1B-002) 67651264-67674610 nonsense_mediated_decay
ENST00000553619 (VTI1B-004) 67656480-67660194 retained_intron
ENST00000554636 (VTI1B-006) 67651152-67659791 protein_coding
ENST00000554659 (VTI1B-001) 67647075-67674831 protein_coding
ENST00000555543 (VTI1B-003) 67656510-67674820 nonsense_mediated_decay
ENST00000556461 (VTI1B-005) 67651261-67659845 protein_coding
ENSG00000258626 (COX7A2P1)
cytochrome c oxidase subunit VIIa polypeptide 2 (liver) pseudogene 1
ENST00000553847 (COX7A2P1-001) 67652300-67652614 processed_pseudogene
CIL_0001KL_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021125-ENSMUSG00000021124 CGP 10090 12:79130777-79172667
GeneTranscriptPositionBiotype
ENSMUSG00000021124 (Vti1b)
vesicle transport through interaction with t-SNAREs 1B
ENSMUST00000055262 (Vti1b-001) 79156017-79172667 protein_coding
ENSMUST00000162569 (Vti1b-004) 79156329-79165139 protein_coding
ENSMUST00000162789 (Vti1b-002) 79156170-79172448 nonsense_mediated_decay
ENSMUST00000163031 (Vti1b-003) 79156517-79166368 nonsense_mediated_decay
ENSMUSG00000021125 (Arg2)
arginase type II
ENSMUST00000021550 (Arg2-001) 79130777-79156301 protein_coding
ENSMUSG00000091507 (Gm17194)
predicted gene 17194
ENSMUST00000164610 (Gm17194-001) 79168486-79168833 processed_pseudogene
ENSMUSG00000091534 (Gm17195)
predicted gene 17195
ENSMUST00000170289 (Gm17195-001) 79163408-79163835 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001KL_0001ENSDARG00000039269ENSDART00000057377ENSDARG00000039270ENSDART00000057379ENSDART00000135955CIL_0001KL_0002ENSG00000100568ENST00000216456ENST00000553619ENST00000554636ENST00000554659ENST00000555543ENST00000556461ENSG00000258626ENST00000553847CIL_0001KL_0003ENSMUSG00000021124ENSMUST00000055262ENSMUST00000162569ENSMUST00000162789ENSMUST00000163031ENSMUSG00000021125ENSMUST00000021550ENSMUSG00000091507ENSMUST00000164610ENSMUSG00000091534ENSMUST00000170289
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001KL_0001ENSDARG00000039269ENSDART00000057377ENSDARG00000039270ENSDART00000057379CIL_0001KL_0002ENSG00000100568ENST00000216456ENST00000553619ENST00000554636ENST00000554659ENST00000555543ENSG00000258626ENST00000553847CIL_0001KL_0003ENSMUSG00000021124ENSMUST00000055262ENSMUST00000162569ENSMUST00000162789ENSMUSG00000021125ENSMUST00000021550ENSMUSG00000091507ENSMUST00000164610ENSMUSG00000091534ENSMUST00000170289
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000039269 ENSDART00000057377 N/A N/A N/A 24.566±13.10 N/A N/A 19.961±7.63 18.709±1.66 9.065±0.00 N/A 50.976±0.00 N/A N/A N/A
ENSDARG00000039270 ENSDART00000057379 N/A N/A N/A 4.196±2.06 N/A N/A 3.522±0.78 2.969±2.23 0.517±0.00 N/A 1.204±0.00 N/A N/A N/A
ENSDART00000135955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100568 ENST00000216456 37.049±0.00 26.490±0.00 N/A 52.872±0.00 54.469±0.00 37.264±0.00 14.073±11.26 N/A N/A N/A N/A 26.111±3.67 23.240±7.72 34.939±5.22
ENST00000553619 N/A N/A N/A N/A N/A N/A 11.342±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000554636 42.906±0.00 38.383±0.00 N/A N/A 73.133±0.00 40.903±0.00 N/A N/A N/A N/A 33.944±0.00 42.315±0.00 44.714±13.48 66.283±18.68
ENST00000554659 8.731±0.00 5.620±0.00 5.643±0.00 9.078±0.05 9.885±4.49 6.071±0.47 5.129±2.38 13.566±7.58 4.904±0.56 5.459±0.27 5.570±0.22 5.450±1.56 6.838±1.16 5.076±0.18
ENST00000555543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 39.442±0.00 N/A N/A N/A
ENST00000556461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258626 ENST00000553847 N/A 0.182±0.00 N/A 0.234±0.00 N/A N/A 0.041±0.00 1.076±0.00 N/A N/A N/A 0.136±0.00 0.228±0.00 0.077±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021124 ENSMUST00000055262 12.072±1.17 N/A 40.383±1.72 30.231±8.88 6.993±1.27 12.244±3.01 11.106±0.82 11.135±2.99 7.071±4.21 11.694±2.34 16.598±3.04 9.264±7.32 27.608±3.35 11.130±3.25
ENSMUST00000162569 N/A N/A N/A 128.111±0.00 14.382±0.00 N/A 6.358±0.00 N/A N/A N/A 10.273±1.00 39.781±4.15 50.478±8.08 N/A
ENSMUST00000162789 8.995±2.47 48.714±19.42 10.244±0.00 8.196±0.50 13.962±6.80 31.485±6.24 9.885±3.31 19.104±3.14 11.331±6.99 15.985±2.90 12.218±1.74 12.239±7.09 7.823±1.75 4.012±0.00
ENSMUST00000163031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000021125 ENSMUST00000021550 3.835±0.12 N/A 10.711±1.77 6.308±0.44 5.857±1.58 N/A N/A 12.056±3.01 N/A 3.492±0.43 N/A 5.165±2.01 N/A 3.478±0.00
ENSMUSG00000091507 ENSMUST00000164610 0.780±0.11 1.855±0.00 1.003±0.02 0.603±0.00 2.590±1.57 0.595±0.00 0.576±0.21 0.385±0.16 0.412±0.22 0.606±0.15 0.243±0.11 1.049±0.55 0.683±0.20 0.433±0.18
ENSMUSG00000091534 ENSMUST00000170289 3.080±0.39 1.765±0.44 2.679±0.70 3.623±0.00 2.508±0.68 2.620±0.61 0.905±0.21 1.331±0.46 0.680±0.33 1.781±0.39 0.274±0.12 4.266±1.76 1.552±0.84 0.950±0.47

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