C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001LN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000033733-ENSDARG00000041311 CGP 7955 6:17998946-18236139
GeneTranscriptPositionBiotype
ENSDARG00000033733 (ntn1a)
netrin 1a
ENSDART00000027806 (ntn1a-201) 17998946-18117995 protein_coding
ENSDART00000148565 (ntn1a-001) 17998946-18121555 protein_coding
ENSDART00000149651 (ntn1a-002) 17998946-18079624 protein_coding
ENSDARG00000041311 (stx8)
syntaxin 8
ENSDART00000060547 (stx8-001) 18123023-18236139 protein_coding
ENSDART00000146442 (stx8-002) 18123074-18135403 nonsense_mediated_decay
CIL_0001LN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000065320-ENSG00000170310 CGP 9606 17:9021542-9576591
GeneTranscriptPositionBiotype
ENSG00000065320 (NTN1)
netrin 1
ENST00000173229 (NTN1-001) 9021542-9244000 protein_coding
ENST00000436734 (NTN1-002) 9162935-9183676 protein_coding
ENSG00000225751 (AC087501.1)
ENST00000445617 (AC087501.1-001) 9452197-9470014 antisense
ENSG00000262815 (RP11-565F19.4)
ENST00000576477 (RP11-565F19.4-001) 9464742-9467422 antisense
ENSG00000262966 (RP11-85B7.2)
ENST00000574307 (RP11-85B7.2-001) 9171068-9179118 antisense
ENSG00000263051 (RP11-565F19.3)
ENST00000574460 (RP11-565F19.3-001) 9547298-9548541 antisense
ENSG00000263708 (RP11-85B7.4)
ENST00000579641 (RP11-85B7.4-001) 9283174-9305651 antisense
ENSG00000271851 (RP11-565F19.2)
ENST00000607496 (RP11-565F19.2-001) 9553323-9555696 sense_intronic
ENSG00000273816 (RP11-85B7.5)
ENST00000614522 (RP11-85B7.5-001) 9244666-9244897 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001LN_0001ENSDARG00000033733ENSDART00000027806ENSDART00000148565ENSDART00000149651ENSDARG00000041311ENSDART00000060547ENSDART00000146442CIL_0001LN_0002ENSG00000065320ENST00000173229ENST00000436734ENSG00000225751ENST00000445617ENSG00000262815ENST00000576477ENSG00000262966ENST00000574307ENSG00000263051ENST00000574460ENSG00000263708ENST00000579641ENSG00000271851ENST00000607496ENSG00000273816ENST00000614522
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001LN_0001ENSDARG00000033733ENSDART00000027806ENSDART00000148565ENSDART00000149651ENSDARG00000041311ENSDART00000060547ENSDART00000146442CIL_0001LN_0002ENSG00000065320ENST00000173229ENSG00000225751ENST00000445617ENSG00000262815ENST00000576477ENSG00000262966ENST00000574307ENSG00000263051ENST00000574460ENSG00000263708ENST00000579641ENSG00000271851ENST00000607496ENSG00000273816ENST00000614522
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000033733 ENSDART00000027806 N/A N/A N/A 0.964±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000148565 N/A N/A N/A 1.418±0.11 N/A N/A 1.872±0.68 0.363±0.10 0.152±0.00 N/A 0.332±0.00 N/A N/A N/A
ENSDART00000149651 N/A N/A N/A N/A N/A N/A N/A N/A 0.187±0.00 N/A N/A N/A N/A N/A
ENSDARG00000041311 ENSDART00000060547 N/A N/A N/A 9.285±1.22 N/A N/A 6.030±1.96 6.866±0.97 0.432±0.00 N/A 4.189±0.00 N/A N/A N/A
ENSDART00000146442 N/A N/A N/A 8.250±1.95 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000065320 ENST00000173229 4.486±0.00 6.744±0.00 0.211±0.00 0.992±0.76 1.670±0.85 5.435±5.07 5.594±5.21 1.091±0.42 4.036±3.11 4.192±3.71 0.663±0.39 1.701±0.98 0.881±0.30 2.003±1.43
ENST00000436734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225751 ENST00000445617 N/A N/A N/A N/A 0.154±0.00 N/A 0.017±0.00 0.135±0.00 0.033±0.00 N/A N/A N/A 0.031±0.00 0.034±0.00
ENSG00000262815 ENST00000576477 0.394±0.00 2.027±0.00 N/A 0.794±0.00 1.132±0.00 0.510±0.23 0.627±0.00 1.759±0.00 0.259±0.05 0.686±0.00 0.869±0.00 0.517±0.12 0.120±0.01 0.869±0.20
ENSG00000262966 ENST00000574307 N/A 0.033±0.00 0.009±0.00 0.207±0.00 0.016±0.01 0.047±0.01 0.017±0.01 0.008±0.00 0.031±0.01 0.047±0.02 N/A 0.039±0.02 0.012±0.00 0.048±0.01
ENSG00000263051 ENST00000574460 N/A N/A N/A N/A N/A N/A N/A 0.306±0.00 N/A N/A N/A N/A N/A 0.198±0.00
ENSG00000263708 ENST00000579641 N/A 0.038±0.00 N/A N/A 0.035±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.00
ENSG00000271851 ENST00000607496 0.458±0.00 0.961±0.00 0.213±0.00 0.316±0.04 0.273±0.05 0.205±0.10 0.184±0.09 0.358±0.23 0.399±0.10 0.209±0.00 0.043±0.00 0.350±0.06 0.493±0.29 0.568±0.15
ENSG00000273816 ENST00000614522 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.630±0.00 N/A N/A N/A N/A

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