C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: paired related homeobox 1b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000042027 prrx1b 7955 + 20:34536286-34545649 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000061588 prrx1b-001 34536286-34545649 protein_coding
  ENSDART00000131637 prrx1b-002 34536738-34544216 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000061588ENSDART00000131637
Transcript ID Brain Heart Kidney Muscle
ENSDART00000061588 0.120±0.04 0.084±0.04 0.044±0.05 0.054±0.00
ENSDART00000131637 0.127±0.08 0.342±0.19 0.282±0.00 0.302±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000284 CIL_000284_0001 CGP 20:34525760-34545649

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0010628 IMP positive regulation of gene expression
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000116132 PRRX1 paired related homeobox 1 protein_coding Homo_sapiens
ENSMUSG00000026586 Prrx1 paired related homeobox 1 protein_coding Mus_musculus

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