C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein kinase C and casein kinase substrate in neurons 1b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000042128 pacsin1b 7955 + 6:54142801-54226707 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000056830 pacsin1b-002 54142801-54226707 protein_coding
  ENSDART00000128456 pacsin1b-001 54176812-54226693 protein_coding
  ENSDART00000149542 pacsin1b-003 54194783-54211765 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000056830ENSDART00000128456
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000056830 10.063±2.79 0.639±0.43 2.064±0.19 1.635±0.00 2.644±0.00
ENSDART00000128456 N/A N/A 0.611±0.00 2.956±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004LP CIL_0004LP_0001 CGP 6:54129854-54226707
CIL_0004LR CIL_0004LR_0001 CGP 6:54142801-54245367

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005829 IEA cytosol
GO:0005886 IEA plasma membrane
GO:0006897 IEA endocytosis
GO:0008289 IEA lipid binding
GO:0016020 IEA membrane
GO:0030054 IEA cell junction
GO:0030659 IEA cytoplasmic vesicle membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0032587 IEA ruffle membrane
GO:0042995 IEA cell projection
GO:0043005 IEA neuron projection
GO:0045202 IEA synapse
GO:0060088 IMP auditory receptor cell stereocilium organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000124507 PACSIN1 protein kinase C and casein kinase substrate in neurons 1 protein_coding Homo_sapiens
ENSMUSG00000040276 Pacsin1 protein kinase C and casein kinase substrate in neurons 1 protein_coding Mus_musculus

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