C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004LR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000042128-ENSDARG00000029930 CGP 7955 6:54142801-54245367
GeneTranscriptPositionBiotype
ENSDARG00000029930 (SPDEF)
SAM pointed domain containing ETS transcription factor
ENSDART00000050483 (SPDEF-201) 54235523-54245367 protein_coding
ENSDART00000123955 (SPDEF-202) 54235523-54245232 protein_coding
ENSDARG00000042128 (pacsin1b)
protein kinase C and casein kinase substrate in neurons 1b
ENSDART00000056830 (pacsin1b-002) 54142801-54226707 protein_coding
ENSDART00000128456 (pacsin1b-001) 54176812-54226693 protein_coding
ENSDART00000149542 (pacsin1b-003) 54194783-54211765 protein_coding
CIL_0004LR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000124507-ENSG00000124664 CGP 9606 6:34466061-34556333
GeneTranscriptPositionBiotype
ENSG00000124507 (PACSIN1)
protein kinase C and casein kinase substrate in neurons 1
ENST00000244458 (PACSIN1-001) 34466139-34535231 protein_coding
ENST00000374043 (PACSIN1-003) 34466139-34535229 protein_coding
ENST00000486120 (PACSIN1-005) 34514889-34529552 processed_transcript
ENST00000487760 (PACSIN1-004) 34514890-34527694 processed_transcript
ENST00000493633 (PACSIN1-002) 34485070-34527714 processed_transcript
ENST00000538621 (PACSIN1-201) 34514872-34535221 protein_coding
ENST00000620693 (PACSIN1-202) 34466061-34535221 protein_coding
ENSG00000124664 (SPDEF)
SAM pointed domain containing ETS transcription factor
ENST00000374037 (SPDEF-001) 34537802-34556314 protein_coding
ENST00000544425 (SPDEF-201) 34537802-34556333 protein_coding
CIL_0004LR_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040276-ENSMUSG00000024215 CGP 10090 17:27655509-27728951
GeneTranscriptPositionBiotype
ENSMUSG00000024215 (Spdef)
SAM pointed domain containing ets transcription factor
ENSMUST00000025054 (Spdef-201) 27714447-27728951 protein_coding
ENSMUST00000114870 (Spdef-001) 27714352-27728950 protein_coding
ENSMUST00000127622 (Spdef-003) 27714505-27717582 processed_transcript
ENSMUST00000138970 (Spdef-002) 27719992-27728924 protein_coding
ENSMUST00000167489 (Spdef-202) 27714449-27728889 protein_coding
ENSMUSG00000040276 (Pacsin1)
protein kinase C and casein kinase substrate in neurons 1
ENSMUST00000045896 (Pacsin1-001) 27655588-27711106 protein_coding
ENSMUST00000097360 (Pacsin1-002) 27685197-27708659 protein_coding
ENSMUST00000114872 (Pacsin1-004) 27655643-27708677 protein_coding
ENSMUST00000114873 (Pacsin1-003) 27655509-27708659 protein_coding
ENSMUST00000155259 (Pacsin1-005) 27685227-27686085 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004LR_0001ENSDARG00000029930ENSDART00000050483ENSDART00000123955ENSDARG00000042128ENSDART00000056830ENSDART00000128456ENSDART00000149542CIL_0004LR_0002ENSG00000124507ENST00000244458ENST00000374043ENST00000486120ENST00000487760ENST00000493633ENST00000538621ENST00000620693ENSG00000124664ENST00000374037ENST00000544425CIL_0004LR_0003ENSMUSG00000024215ENSMUST00000025054ENSMUST00000114870ENSMUST00000127622ENSMUST00000138970ENSMUST00000167489ENSMUSG00000040276ENSMUST00000045896ENSMUST00000097360ENSMUST00000114872ENSMUST00000114873ENSMUST00000155259
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004LR_0001ENSDARG00000029930ENSDART00000050483ENSDART00000123955ENSDARG00000042128ENSDART00000056830ENSDART00000128456CIL_0004LR_0002ENSG00000124507ENST00000244458ENST00000374043ENST00000486120ENST00000493633ENST00000538621ENST00000620693ENSG00000124664ENST00000374037ENST00000544425CIL_0004LR_0003ENSMUSG00000024215ENSMUST00000025054ENSMUST00000114870ENSMUST00000127622ENSMUST00000138970ENSMUST00000167489ENSMUSG00000040276ENSMUST00000045896ENSMUST00000097360ENSMUST00000114872ENSMUST00000114873
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000029930 ENSDART00000050483 N/A N/A N/A 0.120±0.00 N/A N/A N/A 0.216±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000123955 N/A N/A N/A 0.307±0.00 N/A N/A 0.153±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000042128 ENSDART00000056830 N/A N/A N/A 10.063±2.79 N/A N/A 0.639±0.43 2.064±0.19 1.635±0.00 N/A 2.644±0.00 N/A N/A N/A
ENSDART00000128456 N/A N/A N/A N/A N/A N/A N/A 0.611±0.00 2.956±0.00 N/A N/A N/A N/A N/A
ENSDART00000149542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124507 ENST00000244458 0.003±0.00 N/A 0.005±0.00 N/A 0.009±0.00 N/A N/A 0.027±0.00 0.009±0.00 N/A 0.004±0.00 0.041±0.03 0.041±0.04 N/A
ENST00000374043 0.004±0.00 0.093±0.00 0.005±0.00 N/A 0.009±0.00 N/A N/A 0.029±0.00 0.020±0.01 N/A 0.005±0.00 0.086±0.01 0.054±0.05 N/A
ENST00000486120 N/A N/A N/A 11.971±0.00 N/A N/A 0.479±0.00 N/A N/A 0.394±0.00 N/A N/A 0.082±0.00 N/A
ENST00000487760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493633 N/A N/A N/A N/A N/A N/A N/A N/A 0.151±0.00 0.985±0.00 N/A N/A 0.259±0.00 N/A
ENST00000538621 N/A N/A N/A 26.473±0.00 N/A 0.591±0.00 N/A N/A N/A N/A N/A 0.175±0.00 N/A N/A
ENST00000620693 0.003±0.00 0.151±0.00 0.002±0.00 33.239±15.22 0.061±0.06 N/A 1.982±0.00 0.408±0.40 0.021±0.02 0.169±0.00 0.004±0.00 0.107±0.00 0.028±0.00 0.516±0.00
ENSG00000124664 ENST00000374037 N/A N/A N/A 0.560±0.40 3.075±1.96 4.786±2.42 N/A N/A N/A 2.322±0.00 N/A 1.138±0.96 N/A 0.402±0.00
ENST00000544425 0.047±0.00 0.017±0.00 N/A N/A 1.044±0.00 N/A 0.017±0.00 0.038±0.00 N/A 0.446±0.00 0.090±0.05 0.849±0.00 0.060±0.02 0.348±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024215 ENSMUST00000025054 0.363±0.03 0.083±0.00 0.086±0.00 N/A 2.845±1.27 88.767±38.78 0.056±0.00 0.034±0.01 0.065±0.05 1.724±0.32 N/A 5.621±2.55 0.153±0.06 N/A
ENSMUST00000114870 N/A 0.057±0.00 N/A 0.246±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.104±0.05 0.141±0.00
ENSMUST00000127622 N/A 0.084±0.06 N/A 0.334±0.00 1.641±0.00 N/A 0.010±0.00 0.124±0.10 0.046±0.03 N/A 0.118±0.03 1.909±0.83 0.627±0.35 1.174±0.52
ENSMUST00000138970 0.039±0.00 0.034±0.00 N/A N/A N/A N/A 0.046±0.00 N/A 0.032±0.02 N/A 0.123±0.00 N/A 0.227±0.00 N/A
ENSMUST00000167489 N/A 0.058±0.04 N/A 0.148±0.00 1.373±0.00 N/A 0.042±0.01 0.027±0.00 0.038±0.02 N/A 0.020±0.00 1.078±0.51 0.150±0.00 N/A
ENSMUSG00000040276 ENSMUST00000045896 0.071±0.04 1.012±0.19 0.156±0.02 19.044±21.20 1.805±1.09 N/A 0.110±0.03 0.184±0.12 0.040±0.01 0.191±0.07 0.056±0.07 0.601±0.24 0.201±0.13 N/A
ENSMUST00000097360 N/A N/A N/A 2.187±0.04 N/A N/A N/A N/A 0.030±0.01 0.239±0.00 N/A 1.883±0.69 N/A N/A
ENSMUST00000114872 0.073±0.00 N/A 0.115±0.01 408.431±0.00 N/A N/A 0.221±0.02 0.136±0.01 0.042±0.01 0.169±0.00 0.037±0.02 1.551±0.81 1.036±1.70 16.511±27.80
ENSMUST00000114873 N/A N/A 0.079±0.00 N/A 0.768±0.29 N/A N/A 0.232±0.08 0.022±0.00 0.174±0.00 0.089±0.00 N/A N/A N/A
ENSMUST00000155259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading