C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cholinergic receptor, nicotinic, alpha 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000054680 chrna9 7955 + 1:22182712-22192005 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000077335 chrna9-201 22182712-22191655 protein_coding
  ENSDART00000140706 chrna9-001 22182716-22192005 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000077335ENSDART00000140706
Transcript ID Brain Heart Kidney Muscle
ENSDART00000077335 0.020±0.00 0.036±0.00 0.090±0.00 0.045±0.00
ENSDART00000140706 0.079±0.03 N/A 0.028±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LL CIL_0005LL_0001 CGP 1:22172499-22192005

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004889 IEA acetylcholine-activated cation-selective channel activity
GO:0005216 IEA ion channel activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005886 IEA plasma membrane
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0030054 IEA cell junction
GO:0045202 IEA synapse
GO:0045211 IEA postsynaptic membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000174343 CHRNA9 cholinergic receptor, nicotinic, alpha 9 (neuronal) protein_coding Homo_sapiens
ENSMUSG00000029205 Chrna9 cholinergic receptor, nicotinic, alpha polypeptide 9 protein_coding Mus_musculus

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