C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RNA binding motif protein 4.2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000055080 rbm4.2 7955 + 7:23963174-23967956 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000077395 rbm4.2-201 23963208-23967857 protein_coding
  ENSDART00000112169 rbm4.2-001 23963208-23967858 protein_coding
  ENSDART00000133632 rbm4.2-004 23963367-23964688 retained_intron
  ENSDART00000140914 rbm4.2-003 23963174-23967956 processed_transcript
  ENSDART00000146368 rbm4.2-002 23963820-23967858 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000077395ENSDART00000112169ENSDART00000133632ENSDART00000140914ENSDART00000146368
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000077395 N/A 3.374±0.00 N/A 2.655±0.00 2.078±0.00
ENSDART00000112169 5.168±0.00 5.216±0.00 N/A N/A 6.028±0.00
ENSDART00000133632 N/A 4.316±0.00 N/A N/A N/A
ENSDART00000140914 28.135±1.12 33.984±15.51 33.824±16.78 N/A N/A
ENSDART00000146368 16.789±0.00 7.460±3.67 13.784±6.23 1.990±0.00 2.083±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003YM CIL_0003YM_0001 CGP 7:23959223-23967956
CIL_0003YM CIL_0003YM_0002 CGP 7:23963174-23973894

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000173914 RBM4B RNA binding motif protein 4B protein_coding Homo_sapiens
ENSG00000173933 RBM4 RNA binding motif protein 4 protein_coding Homo_sapiens
ENSG00000248643 RBM14-RBM4 RBM14-RBM4 readthrough protein_coding Homo_sapiens
ENSMUSG00000033760 Rbm4b RNA binding motif protein 4B protein_coding Mus_musculus
ENSMUSG00000094936 Rbm4 RNA binding motif protein 4 protein_coding Mus_musculus
ENSMUSG00000096370 Gm21992 predicted gene 21992 protein_coding Mus_musculus

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