C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proteasome (prosome, macropain) 216S subunit, non-ATPase, 11a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000060150 psmd11a 7955 - 3:34889244-34902189 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000084448 psmd11a-001 34889244-34902189 protein_coding
  ENSDART00000151449 psmd11a-003 34889543-34891375 retained_intron
  ENSDART00000151537 psmd11a-002 34891135-34899265 nonsense_mediated_decay
  ENSDART00000154696 psmd11a-201 34889251-34902139 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000084448ENSDART00000151449ENSDART00000154696
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000084448 4.015±0.00 3.158±1.53 8.489±0.76 N/A 0.889±0.00
ENSDART00000151449 1.071±0.00 N/A 2.186±0.00 N/A N/A
ENSDART00000154696 5.615±4.44 3.481±1.14 9.239±0.00 3.580±0.00 3.801±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RM CIL_0005RM_0002 CGP 3:34889244-34907616

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005829 IEA cytosol
GO:0006511 ISS ubiquitin-dependent protein catabolic process
GO:0022624 ISS proteasome accessory complex
GO:0043248 ISS proteasome assembly
GO:0048863 ISS stem cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000108671 PSMD11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 protein_coding Homo_sapiens
ENSMUSG00000017428 Psmd11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 protein_coding Mus_musculus

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