C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: proteasome (prosome, macropain) 216S subunit, non-ATPase, 11a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000084448 psmd11a-001 ENSDARG00000060150 7955 - 3:34889244-34902189 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000084448
Transcript ID Brain Heart Kidney Muscle
ENSDART00000084448 4.015±0.00 3.158±1.53 8.489±0.76 0.889±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RM CIL_0005RM_0002 CGP 3:34889244-34907616

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005829 IEA cytosol
GO:0006511 ISS ubiquitin-dependent protein catabolic process
GO:0022624 ISS proteasome accessory complex
GO:0043248 ISS proteasome assembly
GO:0048863 ISS stem cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261712 PSMD11-001 protein_coding Homo_sapiens 0 789
ENST00000457654 PSMD11-004 protein_coding Homo_sapiens 0 791
ENST00000469475 PSMD11-003 retained_intron Homo_sapiens 1.99993e-41 172
ENST00000493026 PSMD11-002 retained_intron Homo_sapiens 3.00004e-41 174
ENST00000585265 PSMD11-011 retained_intron Homo_sapiens 7e-33 145

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