C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: integrin alpha 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000061186 itga4 7955 + 9:45108068-45154224 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000086963 itga4-201 45108199-45154224 protein_coding
  ENSDART00000149577 itga4-001 45108068-45153578 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000086963ENSDART00000149577
Transcript ID Brain Heart Liver Muscle
ENSDART00000086963 0.680±0.27 0.381±0.10 0.096±0.00 0.164±0.00
ENSDART00000149577 0.468±0.30 0.351±0.12 N/A 0.181±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004BZ CIL_0004BZ_0001 CGP 9:44870945-45154224
CIL_0004C0 CIL_0004C0_0001 CGP 9:45108068-45355573

Gene Ontology
GO IDEvidence TypeGO Description
GO:0007155 IEA cell adhesion
GO:0007229 IEA integrin-mediated signaling pathway
GO:0008305 IEA integrin complex
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000115232 ITGA4 integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor) protein_coding Homo_sapiens
ENSMUSG00000027009 Itga4 integrin alpha 4 protein_coding Mus_musculus

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