C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000061335 galnt1 7955 + 16:29114198-29351259 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000087368 galnt1-201 29225383-29351259 protein_coding
  ENSDART00000140673 galnt1-001 29114198-29351259 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000087368ENSDART00000140673
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000087368 6.895±2.16 6.180±2.47 3.704±0.11 0.169±0.00 1.255±0.00
ENSDART00000140673 14.836±0.43 6.054±2.59 4.879±0.00 0.643±0.00 3.885±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FM CIL_0002FM_0001 CGP 16:29101265-29351259

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016740 IEA transferase activity
GO:0016757 IEA transferase activity, transferring glycosyl groups

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000141429 GALNT1 polypeptide N-acetylgalactosaminyltransferase 1 protein_coding Homo_sapiens
ENSMUSG00000000420 Galnt1 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 protein_coding Mus_musculus

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