C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000087368 galnt1-201 ENSDARG00000061335 7955 + 16:29225383-29351259 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000087368
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000087368 6.895±2.16 6.180±2.47 3.704±0.11 0.169±0.00 1.255±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FM CIL_0002FM_0001 CGP 16:29101265-29351259

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016740 IEA transferase activity
GO:0016757 IEA transferase activity, transferring glycosyl groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000269195 GALNT1-001 protein_coding Homo_sapiens 0 1029
ENST00000589189 GALNT1-004 nonsense_mediated_decay Homo_sapiens 0 660
ENST00000590654 GALNT1-003 nonsense_mediated_decay Homo_sapiens 0 970

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