C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cadherin 18, type 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000061371 cdh18 7955 + 2:28964393-29067510 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000025562 cdh18-002 28972807-29067510 protein_coding
  ENSDART00000099157 cdh18-001 28964393-28974091 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000025562ENSDART00000099157
Transcript ID Brain Heart Kidney Liver
ENSDART00000025562 3.029±2.25 0.079±0.00 0.530±0.00 0.028±0.00
ENSDART00000099157 0.162±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003XA CIL_0003XA_0002 CGP 2:28710608-29067510

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007155 IEA cell adhesion
GO:0007156 IEA homophilic cell adhesion
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000145526 CDH18 cadherin 18, type 2 protein_coding Homo_sapiens
ENSMUSG00000040420 Cdh18 cadherin 18 protein_coding Mus_musculus

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