C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: jumonji, AT rich interactive domain 2b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000062268 jarid2b 7955 + 19:26457126-26644445 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000089836 jarid2b-201 26457126-26644445 protein_coding
  ENSDART00000147627 jarid2b-001 26558289-26642196 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000089836ENSDART00000147627
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000089836 0.588±0.21 0.467±0.30 1.166±0.10 N/A 0.145±0.00
ENSDART00000147627 N/A N/A N/A 0.017±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BY CIL_0001BY_0002 CGP 19:26457126-26720884

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 ISS chromatin binding
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0016568 IEA chromatin modification
GO:0030154 IEA cell differentiation
GO:0031061 ISS negative regulation of histone methylation
GO:0035097 ISS histone methyltransferase complex
GO:0035098 ISS ESC/E(Z) complex
GO:0045892 ISS negative regulation of transcription, DNA-dependent
GO:0048863 ISS stem cell differentiation
GO:0051574 ISS positive regulation of histone H3-K9 methylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000008083 JARID2 jumonji, AT rich interactive domain 2 protein_coding Homo_sapiens
ENSMUSG00000038518 Jarid2 jumonji, AT rich interactive domain 2 protein_coding Mus_musculus

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