C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: jumonji, AT rich interactive domain 2b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000089836 jarid2b-201 ENSDARG00000062268 7955 + 19:26457126-26644445 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000089836
Transcript ID Brain Heart Kidney Muscle
ENSDART00000089836 0.588±0.21 0.467±0.30 1.166±0.10 0.145±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BY CIL_0001BY_0002 CGP 19:26457126-26720884

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044608 Jarid2-002 protein_coding Mus_musculus 0 676
ENSMUST00000172708 Jarid2-016 processed_transcript Mus_musculus 0.0000000000001 81
ENSMUST00000172830 Jarid2-015 protein_coding Mus_musculus 2e-27 126
ENSMUST00000172924 Jarid2-010 processed_transcript Mus_musculus 0.0000000000002 81
ENSMUST00000172977 Jarid2-014 nonsense_mediated_decay Mus_musculus 2e-27 126
ENSMUST00000173246 Jarid2-001 protein_coding Mus_musculus 0 676
ENSMUST00000173367 Jarid2-007 protein_coding Mus_musculus 0.00000001 66
ENSMUST00000173704 Jarid2-003 protein_coding Mus_musculus 0 676
ENSMUST00000173906 Jarid2-006 protein_coding Mus_musculus 0 536
ENSMUST00000174068 Jarid2-011 protein_coding Mus_musculus 2e-27 126
ENSMUST00000174086 Jarid2-013 protein_coding Mus_musculus 3e-18 95
ENSMUST00000174557 Jarid2-004 retained_intron Mus_musculus 5e-27 126
ENSMUST00000174683 Jarid2-005 retained_intron Mus_musculus 1e-35 158
ENST00000341776 JARID2-001 protein_coding Homo_sapiens 0 848
ENST00000397311 JARID2-201 protein_coding Homo_sapiens 0 848
ENST00000474854 JARID2-002 processed_transcript Homo_sapiens 0 224

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