C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: small nuclear RNA activating complex, polypeptide 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000067673 snapc4 7955 - 5:52861124-52884641 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000097473 snapc4-201 52868033-52877405 protein_coding
  ENSDART00000132503 snapc4-002 52881385-52884641 protein_coding
  ENSDART00000141424 snapc4-001 52861124-52877562 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000132503ENSDART00000141424
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000132503 2.000±0.18 0.855±0.37 0.201±0.00 0.101±0.00 0.476±0.00
ENSDART00000141424 2.044±0.37 1.024±0.65 1.110±0.55 0.271±0.00 0.438±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002E9 CIL_0002E9_0001 CGP 5:52843283-52884641
CIL_0002E3 CIL_0002E3_0001 CGP 5:52861124-52895312

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005634 IEA nucleus
GO:0008283 IMP cell proliferation
GO:0031016 IMP pancreas development
GO:0035622 IMP intrahepatic bile duct development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000165684 SNAPC4 small nuclear RNA activating complex, polypeptide 4, 190kDa protein_coding Homo_sapiens
ENSMUSG00000036281 Snapc4 small nuclear RNA activating complex, polypeptide 4 protein_coding Mus_musculus

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